RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Cep83Q9D5R3 692 aa25.94■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Cfap57Q9D180 1249 aa25.94■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Tsnaxip1Q99P25 704 aa25.94■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 MycnP03966 462 aaKnown RBP25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Ubac1Q8VDI7 409 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Trove2O08848 538 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Atp6v0a2P15920 856 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Ttc27Q8CD92 847 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Fam213aQ9CYH2 218 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Becn2P0DM65 447 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Mtx1P47802 317 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Eef2P58252 858 aaKnown RBP25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Atp2a1Q8R429 994 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Pcdhb22Q91XZ8 794 aa25.93■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Naip6Q9JIB6 1403 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Bfsp1A2AMT1 669 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Ccdc129Q14B48 1034 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Pex1Q5BL07 1284 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Ssh2Q5SW75 1423 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Smarcad1Q04692 1021 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Ccdc28aQ8CEI3 192 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Epb41l3Q9WV92 929 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Supt6hQ62383 1726 aaKnown RBP25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Cpsf2O35218 782 aaKnown RBP25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Leo1Q5XJE5 667 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Fam204aQ8C6C7 236 aa25.92■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Pak1O88643 545 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Mcm7Q61881 719 aaKnown RBP25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Lin9Q8C735 542 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Rab44Q8CB87 725 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Slc38a10Q5I012 1090 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 FanccP50652 591 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Cct5P80316 541 aaKnown RBP25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Nsfl1cQ9CZ44 370 aaKnown RBP25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Neo1P97798 1493 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Ano9P86044 747 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Cct6bQ61390 531 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Rab3gap1Q80UJ7 981 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Frat2Q8K025 231 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Mlh1Q9JK91 760 aa25.91■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Nom1Q3UFM5 854 aaKnown RBP25.9■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Swap70Q6A028 585 aaKnown RBP25.9■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 HhatQ8BMT9 499 aa25.9■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Gtpbp10Q8K013 366 aa25.9■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Zfp597E9Q6S0 419 aa25.9■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 CltaO08585 235 aa25.9■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Ubn2Q80WC1 1314 aa25.89■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Astn2Q80Z10 1352 aa25.89■■□□□ 1.74
Sh3rf1-201ENSMUST00000034060 Pdrg1P59048 133 aa25.89■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Nsd3Q6P2L6 1439 aa25.89■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Mug2P28666 1451 aa25.89■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Zfp51Q3U4L8 781 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Znf18Q810A1 556 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Zfp202Q8C879 641 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Xpo4Q9ESJ0 1151 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Krit1Q6S5J6 736 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Asic2Q925H0 512 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Bicc1Q99MQ1 977 aaKnown RBP25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Kifap3P70188 793 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Grin2aP35436 1464 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Edc4Q3UJB9 1406 aaKnown RBP25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 RilpQ5ND29 369 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Angptl3Q9R182 455 aa25.88■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Pa2g4P50580 394 aaKnown RBP25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 PsdQ5DTT2 1024 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Wdr3Q8BHB4 942 aaKnown RBP25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Traf3ip3Q8C0G2 513 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Klhl20Q8VCK5 604 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 CactinQ9CS00 772 aaKnown RBP25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Noc2lQ9WV70 747 aaKnown RBP25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Fancd2Q80V62 1450 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Arhgef2Q60875 985 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Heatr4E9Q357 955 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Nlrp2Q4PLS0 1046 aaKnown RBP25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Nsrp1Q5NCR9 542 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Gimap8Q75N62 688 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Nedd9O35177 833 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Abcb4P21440 1276 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Psmc4P54775 418 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Ttll12Q3UDE2 639 aa25.87■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Cep63Q3UPP8 700 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Jade3Q6IE82 823 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Ppp2r5bQ6PD28 497 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Efcab2Q9CQ46 164 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Gngt1Q61012 74 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Acsbg1Q99PU5 721 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Cabp5Q9JLK3 173 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Q4VA45 678 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 2310002L09RikQ9D7L5 217 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Znf365Q8BG89 408 aa25.86■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Fhdc1Q3ULZ2 1149 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Msantd4Q91YU3 345 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 S100bP50114 92 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Ncf1Q09014 390 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Kif2bQ8C0N1 668 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Xrcc4Q924T3 326 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Mast3Q3U214 1321 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Nbr1P97432 988 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Kif1bpQ6ZPU9 617 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Hgh1Q8C3I8 393 aa25.85■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms