RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 PzpQ61838 1495 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Uhrf1bp1lA2RSJ4 1457 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Cnksr1A2A9K7 700 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Znf568E9PYI1 671 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Cers3Q1A3B0 383 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Zfp91Q62511 572 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 ParvgQ9ERD8 331 aa12.19□□□□□ -0.46
Ciita-201ENSMUST00000023147 Rbm26Q6NZN0 1012 aaKnown RBP12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tceanc2Q8R2M0 207 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Arfgap2Q99K28 520 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Golga5Q9QYE6 729 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Zfp597E9Q6S0 419 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 GnaqP21279 359 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tex35Q14BK3 207 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Kmt5bQ3U8K7 883 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Oxsr1Q6P9R2 527 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Nop2Q922K7 793 aaKnown RBP12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 PtprtQ99M80 1454 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Palm3A2TJV2 734 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Mnat1P51949 309 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Bicd1Q8BR07 835 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Slc5a4bQ91ZP4 660 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Cep19Q9CQA8 163 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Metap2O08663 478 aaKnown RBP12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 GnpatP98192 678 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Soga3Q6NZL0 945 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ccdc57Q6PHN1 1016 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Arhgef6Q8K4I3 771 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Dpf1Q9QX66 387 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Asxl2Q8BZ32 1370 aa12.18□□□□□ -0.46
Ciita-201ENSMUST00000023147 Mdm2P23804 489 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ubash3aQ3V3E1 624 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 HellsQ60848 821 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ift88Q61371 824 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Q8BZJ8 459 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Fam177a1Q8BR63 207 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Pet2A2AHY8 747 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Eya1P97767 591 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ltv1Q6NSQ7 470 aaKnown RBP12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ncaph2Q8BSP2 607 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 RarsQ9D0I9 660 aaKnown RBP12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Col4a3bpQ9EQG9 624 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ppfibp1Q8C8U0 969 aaKnown RBP12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Plekho1Q9JIY0 408 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tecpr2Q3UH45 1423 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Spata31d1bE9QA57 1361 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 F2rP30558 430 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Zrsr1Q64707 428 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Elf2Q9JHC9 593 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Atp1a4Q9WV27 1032 aa12.17□□□□□ -0.46
Ciita-201ENSMUST00000023147 Sclt1G5E861 688 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Serpinc1P32261 465 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Sh3bp1P55194 680 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 SkiQ60698 725 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Pdcd11Q6NS46 1862 aaKnown RBP12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Map3k9Q3U1V8 1077 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ccdc148Q6P5U8 527 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 GckrQ91X44 587 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Bicc1Q99MQ1 977 aaKnown RBP12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Gm7347D3YYI9 267 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Smarcc2Q6PDG5 1213 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Fmnl3Q6ZPF4 1028 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Luc7l2Q7TNC4 392 aaKnown RBP12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Lrrc8aQ80WG5 810 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Prune1Q8BIW1 454 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Rbm33Q9CXK9 1231 aaKnown RBP12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Myd88P22366 296 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Usp5P56399 858 aaKnown RBP12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Cdr2P97817 455 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Gm28047Q3US59 414 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Filip1Q9CS72 1211 aa12.16□□□□□ -0.46
Ciita-201ENSMUST00000023147 Adgrl1Q80TR1 1466 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Gm28919A0A087WP35 240 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ifit1bl2Q3U687 466 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Tbc1d8bA3KGB4 1114 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Diaph1O08808 1255 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Ccdc82Q6PG04 518 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Hdac9Q99N13 588 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Csrnp1P59054 583 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Morc2aQ69ZX6 1030 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 DlatQ8BMF4 642 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Pcdhb2Q91Y00 799 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Lmbr1lQ9D1E5 489 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Cfap65Q3V0B4 1847 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Knl1Q66JQ7 1612 aa12.15□□□□□ -0.46
Ciita-201ENSMUST00000023147 Golga1Q9CW79 758 aa12.15□□□□□ -0.47
Ciita-201ENSMUST00000023147 Taf7lQ9D3R9 471 aa12.15□□□□□ -0.47
Ciita-201ENSMUST00000023147 Gucy1a3Q9ERL9 691 aa12.15□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cct6bQ61390 531 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Triml1Q8BVP1 470 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Gsta4P24472 222 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Mtx1P47802 317 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Tsr2Q8C8T8 191 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Skor2A7M7C7 1008 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Atp2b1G5E829 1220 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Slc1a4O35874 532 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ttc12Q8BW49 704 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cabp5Q9JLK3 173 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Nup62clA2AG10 272 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Pa2g4P50580 394 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms