RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Pde6aP27664 859 aa17.47■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Sass6Q80UK7 654 aa17.47■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Plbd2Q3TCN2 594 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Llgl2Q3TJ91 1027 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Slc38a10Q5I012 1090 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Myl10Q62082 202 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Fam170aQ66LM6 333 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Ddx54Q8K4L0 874 aaKnown RBP17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Greb1lB9EJV3 1913 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Cplx1P63040 134 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Zfp202Q8C879 641 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Bola3Q8CEI1 110 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Zeb2Q9R0G7 1215 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 CpdO89001 1377 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Pfkfb1P70266 471 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Ube2oQ6ZPJ3 1288 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Prkag3Q8BGM7 489 aa17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Acot9Q9R0X4 439 aaKnown RBP17.46■□□□□ 0.39
Nkx3-1-201ENSMUST00000022646 Myh1Q5SX40 1942 aa17.46■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Plekhf1Q3TB82 279 aa17.45■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Eaf2Q91ZD6 262 aa17.45■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Plekho1Q9JIY0 408 aa17.45■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Stxbp4Q9WV89 557 aa17.45■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Rgs12Q8CGE9 1381 aa17.45■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Zbtb21E9Q444 1094 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Fkbp1aP26883 108 aaKnown RBP17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Dnm1P39053 867 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Washc4Q3UMB9 1173 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Sik1Q60670 779 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Slfnl1Q8BHW9 410 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Krt84Q99M73 603 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Rapgef4Q9EQZ6 1011 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ints4Q8CIM8 964 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 CerkQ8K4Q7 531 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ces1dQ8VCT4 565 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 IcoslgQ9JHJ8 322 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Tulp1Q9Z273 543 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Mroh6V9GX81 722 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Med23Q80YQ2 1367 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Prr5lA2AVJ5 370 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Cdkl5Q3UTQ8 938 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Zfp251Q6PCX8 632 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ehd2Q8BH64 543 aa17.44■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 CebpaP53566 359 aa17.43■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Cplx2P84086 134 aa17.43■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Pram1Q6BCL1 675 aa17.43■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ccdc47Q9D024 483 aaKnown RBP17.43■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 VeztQ3ZK22 780 aa17.43■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Rec8Q8C5S7 591 aa17.43■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Casp12O08736 419 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 NapbP28663 298 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Xpo4Q9ESJ0 1151 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Naaladl2A0A0N4SUJ3 795 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Epha2Q03145 977 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Agtpbp1Q641K1 1218 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Kiaa0753Q6A000 959 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ranbp6Q8BIV3 1105 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Dnaaf4Q8R368 420 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Gys2Q8VCB3 704 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Lrp6O88572 1613 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ankrd31A0A140LI88 1765 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Speer4dL7N216 212 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Gm4340L7N2C4 268 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Kiaa0754Q69ZZ9 979 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Abtb2Q7TQI7 1024 aa17.42■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Nom1Q3UFM5 854 aaKnown RBP17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Susd4Q8BH32 490 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ccdc94Q9D6J3 314 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Lekr1B2RVN1 116 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Zscan29E9Q5B4 869 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 CrcpO35427 148 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Snrpa1P57784 255 aaKnown RBP17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Exoc5Q3TPX4 708 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Gas2l3Q3UWW6 683 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 TfrcQ62351 763 aaKnown RBP17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 CtifQ6PEE2 600 aaKnown RBP17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Nme8Q715T0 586 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Kiaa1524Q8BWY9 907 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 9230110C19RikQ8CC70 267 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Large1Q9Z1M7 756 aa17.41■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ccdc174Q3U155 467 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Slf2Q6P9P0 1278 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Rbm43Q99J64 343 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Card6E9PWH2 1175 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Dnajc2P54103 621 aaKnown RBP17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ap5z1Q3U829 807 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Ufl1Q8CCJ3 793 aaKnown RBP17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Fbxo3Q9DC63 480 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Dctn1O08788 1281 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Cep135Q6P5D4 1140 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Pcdhb14Q6PB90 796 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Gpr108Q91WD0 569 aa17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Mrps25Q9D125 171 aaKnown RBP17.4■□□□□ 0.38
Nkx3-1-201ENSMUST00000022646 Nbr1P97432 988 aa17.39■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Esco1Q69Z69 843 aa17.39■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Vps37dQ810I0 261 aa17.39■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Trim34aQ99PP6 485 aa17.39■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 4931408C20RikE9PWP9 1381 aa17.39■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Lrp5Q91VN0 1614 aa17.39■□□□□ 0.37
Nkx3-1-201ENSMUST00000022646 Sirt2Q8VDQ8 389 aa17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms