RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Mphosph10Q810V0 681 aaKnown RBP14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Vipas39Q8BGQ1 491 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Zswim4Q8C7B8 1101 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Rufy2Q8R4C2 606 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Erc1Q99MI1 1120 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Tubb2bQ9CWF2 445 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Pde3aQ9Z0X4 1141 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Cfap99A0A140LIX9 648 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Terf2ipQ91VL8 393 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Dlg5E9Q9R9 1921 aa14.13□□□□□ -0.15
Trim23-201ENSMUST00000022225 Rsph10bE9PYQ0 876 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Exosc10P56960 887 aaKnown RBP14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Krt39Q6IFX4 482 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Snd1Q78PY7 910 aaKnown RBP14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 ToporslQ9D2F8 683 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Atp12aQ9Z1W8 1035 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Pde4bB1AWC9 736 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Fyb1O35601 819 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Lamb3Q61087 1168 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ovgp1Q62010 721 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ccdc186Q8C9S4 917 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Klhl40Q9D783 621 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ccng2O08918 344 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Wee1P47810 646 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Rad23aP54726 363 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ddx49Q4FZF3 480 aaKnown RBP14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Btbd11Q6GQW0 1109 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Fsd1Q7TPM6 496 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 4930504O13RikQ8C5Z9 145 aa14.12□□□□□ -0.15
Trim23-201ENSMUST00000022225 Shank2Q80Z38 1476 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Cdc27A2A6Q5 825 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Arid3cA6PWV5 409 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Prl7a2O54831 253 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Gm21985Q6P6P5 1106 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Trim6Q8BGE7 488 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Tmem2Q5FWI3 1383 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Col22a1E9Q7P1 1613 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Tubb5P99024 444 aaKnown RBP14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Fam107bQ3TGF2 131 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 RpainQ9CWY9 219 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ccdc47Q9D024 483 aaKnown RBP14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Tpcn1Q9EQJ0 817 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Gabpb2P81069 414 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Tex11Q14AT2 947 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Gm28047Q3US59 414 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Serpinb6Q60854 378 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Sdad1Q80UZ2 687 aaKnown RBP14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Uap1Q91YN5 522 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Klc4Q9DBS5 619 aa14.11□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ahnak2E9PYB0 1738 aaKnown RBP14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 C3P01027 1663 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Lig3P97386 1015 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Rassf10Q8BL43 508 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 SdsQ8VBT2 327 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Stk11Q9WTK7 436 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Vstm4T1NXB5 319 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Sparcl1P70663 650 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Tsr1Q5SWD9 803 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Rec8Q8C5S7 591 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Pms1Q8K119 917 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Uchl5Q9WUP7 329 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Sall1Q9ER74 1322 aa14.1□□□□□ -0.15
Trim23-201ENSMUST00000022225 Msantd4Q91YU3 345 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Bicc1Q99MQ1 977 aaKnown RBP14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Lztr1Q9CQ33 837 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ssr1Q9CY50 286 aaKnown RBP14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Acot9Q9R0X4 439 aaKnown RBP14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Rims2Q9EQZ7 1530 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Usp42B2RQC2 1324 aaKnown RBP14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Sycp2lA0A0M3U1B0 842 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Gm5624F6ZZG8 207 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Alg3Q8K2A8 438 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Synpo2Q91YE8 1087 aaKnown RBP14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Dip2cE9PWR4 1557 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Dnajc21E9Q8D0 531 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ugt1a6bK9J7B2 531 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 CalrP14211 416 aaKnown RBP14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Gas2l3Q3UWW6 683 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ugt1a6Q64435 531 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 BcrQ6PAJ1 1270 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ugt1a7cQ6ZQM8 531 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Ccdc93Q7TQK5 629 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 BlmhQ8R016 455 aa14.09□□□□□ -0.15
Trim23-201ENSMUST00000022225 Atp10bB1AWN4 1474 aa14.08□□□□□ -0.15
Trim23-201ENSMUST00000022225 Cep112Q5PR68 954 aa14.08□□□□□ -0.16
Trim23-201ENSMUST00000022225 Vmn1r218Q8R261 298 aa14.08□□□□□ -0.16
Trim23-201ENSMUST00000022225 Vps54Q5SPW0 977 aa14.08□□□□□ -0.16
Trim23-201ENSMUST00000022225 Pip4k2bQ80XI4 416 aa14.08□□□□□ -0.16
Trim23-201ENSMUST00000022225 RereQ80TZ9 1558 aa14.08□□□□□ -0.16
Trim23-201ENSMUST00000022225 Pla2g4bP0C871 782 aa14.08□□□□□ -0.16
Trim23-201ENSMUST00000022225 Carmil3Q3UFQ8 1375 aa14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 Atp8b5A3FIN4 1183 aa14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 Traf1P39428 409 aa14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 Eif4a1P60843 406 aaKnown RBP14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 Psmb7P70195 277 aa14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 Pcdhb14Q6PB90 796 aa14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 U2af1l4Q8BGJ9 220 aa14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 Mb21d2Q8C525 428 aa14.07□□□□□ -0.16
Trim23-201ENSMUST00000022225 Rassf8Q8CJ96 419 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms