RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ZNF645Q8N7E2 425 aa14.28□□□□□ -0.12
CLN6-214ENST00000636314 LFNGQ8NES3 379 aa14.28□□□□□ -0.12
CLN6-214ENST00000636314 ANXA10Q9UJ72 324 aa14.28□□□□□ -0.12
CLN6-214ENST00000636314 OR2W1Q9Y3N9 320 aa14.28□□□□□ -0.12
CLN6-214ENST00000636314 A0A0A6YYH2 397 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 A6NJ64 397 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 I3L521 148 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 IGLV2-23P01705 113 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 OR8U8P0C7N1 319 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 CD40LGP29965 261 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 DUTP33316 252 aaKnown RBP14.27□□□□□ -0.13
CLN6-214ENST00000636314 TGFBR1P36897 503 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 GNB1P62873 340 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 RUNX1Q01196 453 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 ZNF616Q08AN1 781 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 FXYD3Q14802 87 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 AKIRIN2Q53H80 203 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 TMEM177Q53S58 311 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 CROCCP3Q8IVE0 287 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 CASTOR1Q8WTX7 329 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 YIPF6Q96EC8 236 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 DIABLOQ9NR28 239 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 SPATA2Q9UM82 520 aa14.27□□□□□ -0.13
CLN6-214ENST00000636314 CNIH1O95406 144 aa14.26□□□□□ -0.13
CLN6-214ENST00000636314 ARPC4P59998 168 aa14.26□□□□□ -0.13
CLN6-214ENST00000636314 LSM3P62310 102 aaKnown RBP14.26□□□□□ -0.13
CLN6-214ENST00000636314 C9orf66Q5T8R8 295 aa14.26□□□□□ -0.13
CLN6-214ENST00000636314 OR1N2Q8NGR9 330 aa14.26□□□□□ -0.13
CLN6-214ENST00000636314 DDB2Q92466 427 aa14.26□□□□□ -0.13
CLN6-214ENST00000636314 ZMAT5Q9UDW3 170 aaKnown RBP14.26□□□□□ -0.13
CLN6-214ENST00000636314 LINC00473A8K010 186 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 SEC14L6B5MCN3 397 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 ARPC1BO15143 372 aaKnown RBP14.25□□□□□ -0.13
CLN6-214ENST00000636314 SLC22A5O76082 557 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 CRYZL1O95825 349 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 HLA-DQB1P01920 261 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 CRYGBP07316 175 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 TPPP2P59282 170 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 VMA21Q3ZAQ7 101 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 KCTD9Q7L273 389 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 BEST4Q8NFU0 473 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 U3KQK5 164 aa14.25□□□□□ -0.13
CLN6-214ENST00000636314 LGALS1P09382 135 aaKnown RBP14.24□□□□□ -0.13
CLN6-214ENST00000636314 DGCR2P98153 550 aa14.24□□□□□ -0.13
CLN6-214ENST00000636314 PJVKQ0ZLH3 352 aa14.24□□□□□ -0.13
CLN6-214ENST00000636314 ASPHD1Q5U4P2 390 aa14.24□□□□□ -0.13
CLN6-214ENST00000636314 OSR1Q8TAX0 266 aaPredicted RBP14.24□□□□□ -0.13
CLN6-214ENST00000636314 MS4A10Q96PG2 267 aa14.24□□□□□ -0.13
CLN6-214ENST00000636314 ALX4Q9H161 411 aaPredicted RBP14.24□□□□□ -0.13
CLN6-214ENST00000636314 SLA2Q9H6Q3 261 aa14.24□□□□□ -0.13
CLN6-214ENST00000636314 AUNIPQ9H7T9 357 aa14.24□□□□□ -0.13
CLN6-214ENST00000636314 MRPS7Q9Y2R9 242 aaKnown RBP14.24□□□□□ -0.13
CLN6-214ENST00000636314 RBMX2Q9Y388 322 aaKnown RBP14.24□□□□□ -0.13
CLN6-214ENST00000636314 PRELID3BQ9Y3B1 194 aa14.24□□□□□ -0.13
CLN6-214ENST00000636314 IGKV1D-13A0A0B4J2D9 117 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 SRRM4A7MD48 611 aaKnown RBP14.23□□□□□ -0.13
CLN6-214ENST00000636314 TUSC2O75896 110 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
CLN6-214ENST00000636314 IGKV1-13P0DP09 117 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 UBE2KP61086 200 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 SSBP2P81877 361 aaPredicted RBP14.23□□□□□ -0.13
CLN6-214ENST00000636314 UBE2NLQ5JXB2 153 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 HOGA1Q86XE5 327 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 GVQW1Q8N7I0 195 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 ZNF355PQ9NSJ1 428 aa14.23□□□□□ -0.13
CLN6-214ENST00000636314 RAMP3O60896 148 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 FCGR3BO75015 233 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 IGHV3-11P01762 117 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 TRGV3P03979 118 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 RPS19P39019 145 aaKnown RBP14.22□□□□□ -0.13
CLN6-214ENST00000636314 OR2B11Q5JQS5 317 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 IDO2Q6ZQW0 420 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 TEX45Q8NA69 505 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 POC5Q8NA72 575 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 PHB2Q99623 299 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 DCUN1D5Q9BTE7 237 aa14.22□□□□□ -0.13
CLN6-214ENST00000636314 LINC01619G3V211 115 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 H3BUA1 57 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 CREBL2O60519 120 aaPredicted RBP14.21□□□□□ -0.13
CLN6-214ENST00000636314 IGLV2-14P01704 120 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 FCER2P06734 321 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 PTHLHP12272 177 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 CBX5P45973 191 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 TNXAQ16473 311 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 OVCH2Q7RTZ1 564 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 SAMD12Q8N8I0 201 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 OR5T1Q8NG75 326 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 TCTEX1D2Q8WW35 142 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 S100A16Q96FQ6 103 aaKnown RBP14.21□□□□□ -0.13
CLN6-214ENST00000636314 TMEM68Q96MH6 324 aa14.21□□□□□ -0.13
CLN6-214ENST00000636314 HSD17B10Q99714 261 aaKnown RBP14.21□□□□□ -0.13
CLN6-214ENST00000636314 IGHV4OR15-8A0A075B7B6 117 aa14.2□□□□□ -0.14
CLN6-214ENST00000636314 A0A087WW49 117 aa14.2□□□□□ -0.14
CLN6-214ENST00000636314 TRIM64CA6NLI5 447 aa14.2□□□□□ -0.14
CLN6-214ENST00000636314 OVOL1O14753 267 aa14.2□□□□□ -0.14
CLN6-214ENST00000636314 XRCC3O43542 346 aa14.2□□□□□ -0.14
CLN6-214ENST00000636314 SAA1P0DJI8 122 aaPredicted RBP14.2□□□□□ -0.14
CLN6-214ENST00000636314 FCGR2CP31995 323 aa14.2□□□□□ -0.14
CLN6-214ENST00000636314 SLURP1P55000 103 aa14.2□□□□□ -0.14
CLN6-214ENST00000636314 RPL30P62888 115 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms