RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 H0YJW9 148 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 FCGR3BO75015 233 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 HPRT1P00492 218 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 CD99P14209 185 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 RPA2P15927 270 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 HLA-GP17693 338 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 CD1BP29016 333 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 SAA4P35542 130 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 SRPXP78539 464 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 HABP2Q14520 560 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-209ENST00000620393 RUSC1-AS1Q66K80 236 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 BRD3OSQ6XYD6 125 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF695Q8IW36 515 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
CPNE3-209ENST00000620393 CADM3Q8N126 398 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 DYNAPQ8N1N2 210 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 UXS1Q8NBZ7 420 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 C17orf50Q8WW18 174 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 IL22RA2Q969J5 263 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 MED28Q9H204 178 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 PLEKHA2Q9HB19 425 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 YAE1D1Q9NRH1 226 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 NUP50Q9UKX7 468 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 CSPG4Q6UVK1 2322 aa6.47□□□□□ -1.37
CPNE3-209ENST00000620393 WNK2Q9Y3S1 2297 aa6.46□□□□□ -1.37
CPNE3-209ENST00000620393 CREBBPQ92793 2442 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 A0A1W2PPI3 338 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 HMX3A6NHT5 357 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 DBX1A6NMT0 343 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 FAM90A9PA6NNJ1 464 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 CYSRT1A8MQ03 144 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 A8MV72 311 aaPredicted RBP6.46□□□□□ -1.38
CPNE3-209ENST00000620393 H7C2Y5 167 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 TIMM23O14925 209 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 SSNA1O43805 119 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 RAMP3O60896 148 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 IGKV1-39P01597 117 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 APOA2P02652 100 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 IGKV1D-39P04432 117 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 TNP2Q05952 138 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 RTL8BQ17RB0 113 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 TMEM177Q53S58 311 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 OR2B11Q5JQS5 317 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 DHRS7BQ6IAN0 325 aaPredicted RBP6.46□□□□□ -1.38
CPNE3-209ENST00000620393 LIN54Q6MZP7 749 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 C9orf139Q6ZV77 190 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 LYZL2Q7Z4W2 148 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 PDPNQ86YL7 162 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 OR4S2Q8NH73 311 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 LHFPL5Q8TAF8 219 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 CFHR4Q92496 578 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 RBPMSQ93062 196 aaKnown RBP6.46□□□□□ -1.38
CPNE3-209ENST00000620393 FLYWCH2Q96CP2 140 aaKnown RBP6.46□□□□□ -1.38
CPNE3-209ENST00000620393 RNF5Q99942 180 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 RAB18Q9NP72 206 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 WASHC3Q9Y3C0 194 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 FAM96BQ9Y3D0 163 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 SOX21Q9Y651 276 aaPredicted RBP6.46□□□□□ -1.38
CPNE3-209ENST00000620393 ABCA1O95477 2261 aa6.46□□□□□ -1.38
CPNE3-209ENST00000620393 hCG_2014768A0A024R1R8 64 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 IGHV3-72A0A0B4J1Y9 119 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 A0A0U1RQK1 487 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 DUXBA0A1W2PPF3 345 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 SRRM4A7MD48 611 aaKnown RBP6.45□□□□□ -1.38
CPNE3-209ENST00000620393 VGLL3A8MV65 326 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 ATG12O94817 140 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 S1PR2O95136 353 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 CRYZL1O95825 349 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 LY6G6DO95868 133 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 HRASP01112 189 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 KRASP01116 189 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 IFNA21P01568 189 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 IGKV1-16P04430 117 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 HOXB5P09067 269 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 SULT1A3P0DMM9 295 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 SULT1A4P0DMN0 295 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 NQO2P16083 231 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 VDAC1P21796 283 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 PAX6P26367 422 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 BRS3P32247 399 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 LGALS7P47929 136 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 RAB13P51153 203 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 BCAP31P51572 246 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 DYNLT3P51808 116 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 ARHGDIBP52566 201 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 RRAS2P62070 204 aaPredicted RBP6.45□□□□□ -1.38
CPNE3-209ENST00000620393 RPS16P62249 146 aaKnown RBP6.45□□□□□ -1.38
CPNE3-209ENST00000620393 EBI3Q14213 229 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 FCN2Q15485 313 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 C2orf68Q2NKX9 166 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 FAM120AOSQ5T036 256 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 TMEM268Q5VZI3 342 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 OR4C13Q8NGP0 309 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 OSR1Q8TAX0 266 aaPredicted RBP6.45□□□□□ -1.38
CPNE3-209ENST00000620393 CHAC2Q8WUX2 184 aa6.45□□□□□ -1.38
CPNE3-209ENST00000620393 LSM10Q969L4 123 aaKnown RBP6.45□□□□□ -1.38
CPNE3-209ENST00000620393 SEC22AQ96IW7 307 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms