RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ATP5G3P48201 142 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 GNB1P62873 340 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 Q3ZCU0 254 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 FAM78BQ5VT40 261 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 LINC01551Q86U37 167 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 TAAR6Q96RI8 345 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 SPRR3Q9UBC9 169 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 KLF13Q9Y2Y9 288 aaPredicted RBP17.03■□□□□ 0.32
NEK3-208ENST00000618534 TMEM210A6NLX4 147 aa17.02■□□□□ 0.32
NEK3-208ENST00000618534 KCNIP4Q6PIL6 250 aa17.02■□□□□ 0.32
NEK3-208ENST00000618534 QTRT1Q9BXR0 403 aaKnown RBP17.02■□□□□ 0.32
NEK3-208ENST00000618534 SNRPCP09234 159 aaKnown RBP17.02■□□□□ 0.32
NEK3-208ENST00000618534 IL3RAP26951 378 aa17.02■□□□□ 0.32
NEK3-208ENST00000618534 UBE2NP61088 152 aaKnown RBP17.02■□□□□ 0.32
NEK3-208ENST00000618534 C11orf53Q8IXP5 236 aa17.02■□□□□ 0.32
NEK3-208ENST00000618534 MISP3Q96FF7 219 aa17.02■□□□□ 0.32
NEK3-208ENST00000618534 NOL4LQ96MY1 436 aaPredicted RBP17.02■□□□□ 0.32
NEK3-208ENST00000618534 DERL1Q9BUN8 251 aa17.02■□□□□ 0.32
NEK3-208ENST00000618534 MARCH11A6NNE9 402 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 DEFB108AA8MXU0 73 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 ST8SIA5O15466 376 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 MDS2Q8NDY4 140 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 RFESDQ8TAC1 157 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 DIRC2Q96SL1 478 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 METRNQ9UJH8 293 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 KLRC4-KLRK1H3BQV0 150 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 LYZL6O75951 148 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 IGHV1-2P23083 117 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 TAS2R60P59551 318 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 CST9LP1Q5W188 147 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 OR13A1Q8NGR1 328 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 KLF14Q8TD94 323 aaPredicted RBP17.01■□□□□ 0.31
NEK3-208ENST00000618534 TMEM18Q96B42 140 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 WFIKKN1Q96NZ8 548 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 PSG11Q9UQ72 335 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 WDR83OSQ9Y284 106 aa17.01■□□□□ 0.31
NEK3-208ENST00000618534 CD82P27701 267 aa17■□□□□ 0.31
NEK3-208ENST00000618534 EDDM3BP56851 147 aa17■□□□□ 0.31
NEK3-208ENST00000618534 SSX2Q16385 188 aa17■□□□□ 0.31
NEK3-208ENST00000618534 WASF3Q9UPY6 502 aa17■□□□□ 0.31
NEK3-208ENST00000618534 URB1O60287 2271 aaKnown RBP17■□□□□ 0.31
NEK3-208ENST00000618534 TMEM265A0A087WTH1 108 aa17■□□□□ 0.31
NEK3-208ENST00000618534 PGPEP1LA6NFU8 196 aa17■□□□□ 0.31
NEK3-208ENST00000618534 IFNL4K9M1U5 179 aa17■□□□□ 0.31
NEK3-208ENST00000618534 NDUFB4O95168 129 aa17■□□□□ 0.31
NEK3-208ENST00000618534 CNN1P51911 297 aaKnown RBP17■□□□□ 0.31
NEK3-208ENST00000618534 RNFT1Q5M7Z0 435 aa17■□□□□ 0.31
NEK3-208ENST00000618534 ACP7Q6ZNF0 438 aa17■□□□□ 0.31
NEK3-208ENST00000618534 MRPL41Q8IXM3 137 aaKnown RBP17■□□□□ 0.31
NEK3-208ENST00000618534 C2orf88Q9BSF0 95 aa17■□□□□ 0.31
NEK3-208ENST00000618534 NDUFAF3Q9BU61 184 aa17■□□□□ 0.31
NEK3-208ENST00000618534 IL17BQ9UHF5 180 aa17■□□□□ 0.31
NEK3-208ENST00000618534 PDE6DO43924 150 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 OR9G9P0C7N8 305 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 C1QTNF9P0C862 333 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 CD1BP29016 333 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 LCN2P80188 198 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 PRAMEF6Q5VXH4 476 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 TCTEX1D1Q8N7M0 179 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 ZNF114Q8NC26 417 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 C21orf140B9A014 251 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 RPL15P61313 204 aaKnown RBP16.99■□□□□ 0.31
NEK3-208ENST00000618534 R3HDM4Q96D70 268 aa16.99■□□□□ 0.31
NEK3-208ENST00000618534 HSD17B10Q99714 261 aaKnown RBP16.99■□□□□ 0.31
NEK3-208ENST00000618534 TRGV5A0A0B4J1U4 118 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 A0A0U1RQK1 487 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 ZNF320A2RRD8 509 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 TMPRSS2O15393 492 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 OR4A8P0C604 315 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 TMEM144Q7Z5S9 345 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 GBGT1Q8N5D6 347 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 DCTN5Q9BTE1 182 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 PATZ1Q9HBE1 687 aaKnown RBP16.98■□□□□ 0.31
NEK3-208ENST00000618534 PTPRBP23467 1997 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
NEK3-208ENST00000618534 LTC4SQ16873 150 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 GCNT2Q8N0V5 402 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 KCNIP2Q9NS61 270 aa16.98■□□□□ 0.31
NEK3-208ENST00000618534 CD99P14209 185 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 FOXF2Q12947 444 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 USF2Q15853 346 aaPredicted RBP16.97■□□□□ 0.31
NEK3-208ENST00000618534 MUC3AQ02505 3323 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 ZDBF2Q9HCK1 2354 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 A0A1B0GUS0 222 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 A0A1W2PPV4 95 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 WDR82Q6UXN9 313 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 RAB1CQ92928 201 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 PLPPR2Q96GM1 343 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 TRAPPC1Q9Y5R8 145 aa16.97■□□□□ 0.31
NEK3-208ENST00000618534 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.96■□□□□ 0.31
NEK3-208ENST00000618534 CCKARP32238 428 aa16.96■□□□□ 0.31
NEK3-208ENST00000618534 TGFBR3Q03167 851 aa16.96■□□□□ 0.31
NEK3-208ENST00000618534 PRR7Q8TB68 274 aa16.96■□□□□ 0.31
NEK3-208ENST00000618534 RBFOX2O43251 390 aaKnown RBP eCLIP16.96■□□□□ 0.3
NEK3-208ENST00000618534 WISP2O76076 250 aa16.96■□□□□ 0.3
NEK3-208ENST00000618534 LBHQ53QV2 105 aaPredicted RBP16.96■□□□□ 0.3
NEK3-208ENST00000618534 SDSLQ96GA7 329 aa16.96■□□□□ 0.3
NEK3-208ENST00000618534 LURAP1Q96LR2 239 aa16.96■□□□□ 0.3
NEK3-208ENST00000618534 TMEM204Q9BSN7 226 aa16.96■□□□□ 0.3
NEK3-208ENST00000618534 CXXC4Q9H2H0 198 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms