RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 TMEM30BQ3MIR4 351 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 RCC1LQ96I51 464 aaKnown RBP9.86□□□□□ -0.83
SRRT-213ENST00000611405 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 QTRT1Q9BXR0 403 aaKnown RBP9.86□□□□□ -0.83
SRRT-213ENST00000611405 VSIRQ9H7M9 311 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 J3KRW8 73 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 OR9G9P0C7N8 305 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 SELLP14151 372 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 ZNF726P1Q15940 193 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 RPL39P5Q59GN2 51 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 TEX36Q5VZQ5 186 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 ZNF788Q6ZQV5 615 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 CISD1Q9NZ45 108 aaKnown RBP9.86□□□□□ -0.83
SRRT-213ENST00000611405 GNG13Q9P2W3 67 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 PUS1Q9Y606 427 aaKnown RBP eCLIP9.86□□□□□ -0.83
SRRT-213ENST00000611405 DPRXA6NFQ7 191 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 TSPAN9O75954 239 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 MT-ND4LP03901 98 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 CD55P08174 381 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 TNFRSF1AP19438 455 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 SPCS3P61009 180 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 VWC2Q2TAL6 325 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 PRAMEF5Q5TYX0 476 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 LCN15Q6UWW0 184 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 DEFB108BQ8NET1 73 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 OR52E5Q8NH55 327 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 OR4A16Q8NH70 328 aa9.86□□□□□ -0.83
SRRT-213ENST00000611405 CADP27708 2225 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 USF3Q68DE3 2245 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 MBP02144 154 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 NQO2P16083 231 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 RPP30P78346 268 aaKnown RBP9.85□□□□□ -0.83
SRRT-213ENST00000611405 RNF212Q495C1 297 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 CORO2AQ92828 525 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 HIST1H2BAQ96A08 127 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 CCL13Q99616 98 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 LINC00574Q9H8X3 128 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 GVINP1Q7Z2Y8 2422 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 SPENQ96T58 3664 aaKnown RBP9.85□□□□□ -0.83
SRRT-213ENST00000611405 ZNF729A6NN14 1252 aaPredicted RBP9.85□□□□□ -0.83
SRRT-213ENST00000611405 VSTM5A8MXK1 200 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 H3BQ15 152 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 K7ENP7 123 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 SLC31A2O15432 143 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 IFNA17P01571 189 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 GYPAP02724 150 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 BCL2P10415 239 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 ELLP55199 621 aaPredicted RBP9.85□□□□□ -0.83
SRRT-213ENST00000611405 PMS2P11Q13670 270 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 ADIPOQQ15848 244 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 CT45A1Q5HYN5 189 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 CYB561D1Q8N8Q1 229 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 OR4S2Q8NH73 311 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 CT45A3Q8NHU0 189 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 DDB2Q92466 427 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 IDI2-AS1Q9NZ38 188 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 CFAP47Q6ZTR5 3102 aa9.85□□□□□ -0.83
SRRT-213ENST00000611405 DSPP15924 2871 aaKnown RBP9.84□□□□□ -0.83
SRRT-213ENST00000611405 IFNA1P01562 189 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 THBDP07204 575 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 OR4A8P0C604 315 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 FGF7P21781 194 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 RAB13P51153 203 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 C21orf62-AS1Q17RA5 79 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 PDLIM3Q53GG5 364 aaPredicted RBP9.84□□□□□ -0.83
SRRT-213ENST00000611405 DUX4L9Q6RFH8 374 aaPredicted RBP9.84□□□□□ -0.83
SRRT-213ENST00000611405 ZNF429Q86V71 674 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 ADTRPQ96IZ2 230 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 CEP250Q9BV73 2442 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 AKAP13Q12802 2813 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 MAP1LC3B2A6NCE7 125 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 NKX6-3A6NJ46 265 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 C17orf100A8MU93 164 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 IGHV3-7P01780 117 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 DAOP14920 347 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 THBS3P49746 956 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 OR2B8PP59922 312 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 SPINK9Q5DT21 86 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 MAP1LC3BQ9GZQ8 125 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 SLC39A9Q9NUM3 307 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 MUC6Q6W4X9 2439 aa9.84□□□□□ -0.83
SRRT-213ENST00000611405 C15orf62A8K5M9 175 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 FBP1P09467 338 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 CEBPGP53567 150 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 RBPJQ06330 500 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 BSPH1Q075Z2 132 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 MAJINQ3KP22 176 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 SSX7Q7RTT5 188 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 FAM216BQ8N7L0 139 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 ZNF709Q8N972 641 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 SNRNP40Q96DI7 357 aaKnown RBP9.83□□□□□ -0.84
SRRT-213ENST00000611405 P2RX4Q99571 388 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 BIN3Q9NQY0 253 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 SH3BGRL2Q9UJC5 107 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 FGF8P55075 233 aaPredicted RBP9.83□□□□□ -0.84
SRRT-213ENST00000611405 RAB5BP61020 215 aa9.83□□□□□ -0.84
SRRT-213ENST00000611405 MRPS11P82912 194 aaKnown RBP9.83□□□□□ -0.84
SRRT-213ENST00000611405 SSX9Q7RTT3 188 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms