RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TSPAN5P62079 268 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 SSBP2P81877 361 aaPredicted RBP10.86□□□□□ -0.67
VRK3-219ENST00000600137 KLF9Q13886 244 aaPredicted RBP10.86□□□□□ -0.67
VRK3-219ENST00000600137 MMDQ15546 238 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 BAK1Q16611 211 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 C5orf64Q2M2E5 130 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 PYDC2Q56P42 97 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 SPANXN2Q5MJ10 180 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 C12orf54Q6X4T0 127 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 LINC00299Q6ZSB3 139 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 Q8N402 240 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 OR2T6Q8NHC8 308 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
VRK3-219ENST00000600137 HSD17B10Q99714 261 aaKnown RBP10.86□□□□□ -0.67
VRK3-219ENST00000600137 HSPB9Q9BQS6 159 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 TAS2R8Q9NYW2 309 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 TNFSF12O43508 249 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 PGLYRP1O75594 196 aaPredicted RBP10.85□□□□□ -0.67
VRK3-219ENST00000600137 APOA2P02652 100 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 VSIG10L2P0DP72 767 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 RRASP10301 218 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 LGALS7P47929 136 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 RPS16P62249 146 aaKnown RBP10.85□□□□□ -0.67
VRK3-219ENST00000600137 OR13C8Q8NGS7 320 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 TERB2Q8NHR7 220 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 FBXL15Q9H469 300 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 AKIP1Q9NQ31 210 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 PKD1L1Q8TDX9 2849 aa10.85□□□□□ -0.67
VRK3-219ENST00000600137 IGHV7-81A0A0B4J1V7 117 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 GPR31O00270 319 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 RAMP3O60896 148 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 FCGR3BO75015 233 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 PEX14O75381 377 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 HLA-DRB1P01911 266 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 AKAIN1P0CW23 69 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 KCTD9Q7L273 389 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 GDPD1Q8N9F7 314 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 CITED1Q99966 193 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 RASL11BQ9BPW5 248 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 TPSG1Q9NRR2 321 aa10.84□□□□□ -0.67
VRK3-219ENST00000600137 HAX1O00165 279 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 SPDEFO95238 335 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 CRYZL1O95825 349 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 IFNA6P05013 189 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 EGR2P11161 476 aaPredicted RBP10.83□□□□□ -0.68
VRK3-219ENST00000600137 VDAC2P45880 294 aaPredicted RBP10.83□□□□□ -0.68
VRK3-219ENST00000600137 NDPQ00604 133 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 MEF2DQ14814 521 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 RTL8BQ17RB0 113 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 ZNF585BQ52M93 769 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 OR2B11Q5JQS5 317 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 LIN54Q6MZP7 749 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 C10orf99Q6UWK7 81 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 KLHDC1Q8N7A1 406 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 OR51S1Q8NGJ8 323 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 TCTEX1D2Q8WW35 142 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 NOL4LQ96MY1 436 aaPredicted RBP10.83□□□□□ -0.68
VRK3-219ENST00000600137 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
VRK3-219ENST00000600137 HRASLSQ9HDD0 168 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 SLC2A8Q9NY64 477 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 PTTG2Q9NZH5 202 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 PRELID3BQ9Y3B1 194 aa10.83□□□□□ -0.68
VRK3-219ENST00000600137 RBFOX2O43251 390 aaKnown RBP eCLIP10.82□□□□□ -0.68
VRK3-219ENST00000600137 SLC25A17O43808 307 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 IGF1P05019 195 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 IL6RP08887 468 aaPredicted RBP10.82□□□□□ -0.68
VRK3-219ENST00000600137 CX3CL1P78423 397 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 ZNF45Q02386 682 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 TCTEX1D4Q5JR98 221 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 HIST2H2BDQ6DRA6 164 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 LPCAT3Q6P1A2 487 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 SLC35E3Q7Z769 313 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 SLC38A6Q8IZM9 456 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 SPAG16Q8N0X2 631 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 C3orf56Q8N813 242 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 OSR1Q8TAX0 266 aaPredicted RBP10.82□□□□□ -0.68
VRK3-219ENST00000600137 MARCH1Q8TCQ1 289 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 HARBI1Q96MB7 349 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
VRK3-219ENST00000600137 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
VRK3-219ENST00000600137 LINC00527Q9UJ94 153 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 GPR132Q9UNW8 380 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 FBXO7Q9Y3I1 522 aa10.82□□□□□ -0.68
VRK3-219ENST00000600137 CMYA5Q8N3K9 4069 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 DISC1C4P0D8 188 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 ARPC1BO15143 372 aaKnown RBP10.81□□□□□ -0.68
VRK3-219ENST00000600137 SHOXO15266 292 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 RLN1P04808 185 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 PI3P19957 117 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
VRK3-219ENST00000600137 UBE2KP61086 200 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 RND3P61587 244 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 CFHR3Q02985 330 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 SCGB2B2Q4G0G5 96 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 PHLDA2Q53GA4 152 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 C19orf54Q5BKX5 351 aa10.81□□□□□ -0.68
VRK3-219ENST00000600137 ZNF562Q6V9R5 426 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms