RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 V9GYH0 126 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 SHOXO15266 292 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 KCNAB3O43448 404 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 FCGR3BO75015 233 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 CRYZL1O95825 349 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 ETV6P41212 452 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 MEF2DQ14814 521 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 PLGLAQ15195 96 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 TMEM177Q53S58 311 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 OR2B11Q5JQS5 317 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 LIN54Q6MZP7 749 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 LPCAT3Q6P1A2 487 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 ZNF818PQ6ZRF7 136 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 CENPVQ7Z7K6 275 aaPredicted RBP11.36□□□□□ -0.59
LIG1-208ENST00000595758 ARRDC1Q8N5I2 433 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 THAP7Q9BT49 309 aaPredicted RBP11.36□□□□□ -0.59
LIG1-208ENST00000595758 FXYD6Q9H0Q3 95 aa11.36□□□□□ -0.59
LIG1-208ENST00000595758 LINC01548A6NM66 108 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 SPDEFO95238 335 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 FOXRED2Q8IWF2 684 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 CMTM1Q8IZ96 169 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 Q8N402 240 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 HARBI1Q96MB7 349 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 CITED1Q99966 193 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 HSPB9Q9BQS6 159 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 BATF3Q9NR55 127 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 METTL1Q9UBP6 276 aaKnown RBP11.35□□□□□ -0.59
LIG1-208ENST00000595758 ANK2Q01484 3957 aa11.35□□□□□ -0.59
LIG1-208ENST00000595758 AP4M1O00189 453 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 GPR31O00270 319 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 SLC25A17O43808 307 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 IGLV2-23P01705 113 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 AKAIN1P0CW23 69 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 KIR2DS2P43631 304 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 UCP3P55916 312 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 CATR1Q13166 79 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 ZNF79Q15937 498 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 CNPY1Q3B7I2 92 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 AADACL3Q5VUY0 350 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 LHFPL1Q86WI0 220 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 SLC38A6Q8IZM9 456 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 OR4S2Q8NH73 311 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 TERB2Q8NHR7 220 aa11.34□□□□□ -0.59
LIG1-208ENST00000595758 OSR1Q8TAX0 266 aaPredicted RBP11.34□□□□□ -0.59
LIG1-208ENST00000595758 NOL4LQ96MY1 436 aaPredicted RBP11.34□□□□□ -0.59
LIG1-208ENST00000595758 IGHV7-81A0A0B4J1V7 117 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 ANKRD20A5PA0PJZ0 165 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.6
LIG1-208ENST00000595758 DISC1C4P0D8 188 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 FCN1O00602 326 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 PGLYRP1O75594 196 aaPredicted RBP11.33□□□□□ -0.6
LIG1-208ENST00000595758 ZNF735P0CB33 412 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 PGAM2P15259 253 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 S100GP29377 79 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 BRWD1-AS2P59051 145 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 VMA21Q3ZAQ7 101 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 SCGB2B2Q4G0G5 96 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 PHLDA2Q53GA4 152 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 SPAG16Q8N0X2 631 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 C11orf44Q8N8P7 122 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 POC5Q8NA72 575 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 OR5AU1Q8NGC0 362 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 OR51H1Q8NH63 302 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 WIPF2Q8TF74 440 aaPredicted RBP11.33□□□□□ -0.6
LIG1-208ENST00000595758 CHPT1Q8WUD6 406 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 CLCC1Q96S66 551 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 RSRP1Q9BUV0 290 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 OR51J1Q9H342 316 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 LINC00527Q9UJ94 153 aa11.33□□□□□ -0.6
LIG1-208ENST00000595758 PSMB11A5LHX3 300 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
LIG1-208ENST00000595758 FBXO24O75426 580 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 RLN1P04808 185 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 CRYGBP07316 175 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 CD28P10747 220 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 AP3S2P59780 193 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 UBE2KP61086 200 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 CX3CL1P78423 397 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 FAAP20Q6NZ36 180 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 STPG2Q8N412 459 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 OR4C16Q8NGL9 310 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 CD300LFQ8TDQ1 290 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 TRIM63Q969Q1 353 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 SRRQ9GZT4 340 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 PARP11Q9NR21 331 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 TPSG1Q9NRR2 321 aa11.32□□□□□ -0.6
LIG1-208ENST00000595758 RAMP3O60896 148 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 IGF1P05019 195 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 PPP5CP53041 499 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 SLC35B1P78383 322 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 ZNF562Q6V9R5 426 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 ZNF329Q86UD4 541 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 TOMM5Q8N4H5 51 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 GDPD1Q8N9F7 314 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 TEX45Q8NA69 505 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 ABHD5Q8WTS1 349 aa11.31□□□□□ -0.6
LIG1-208ENST00000595758 PRRT1Q99946 306 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms