RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 RRM2BQ7LG56 351 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 VTCN1Q7Z7D3 282 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 TMED4Q7Z7H5 227 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 TPRA1Q86W33 373 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 WFDC10BQ8IUB3 73 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 C1orf158Q8N1D5 194 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 LRTM2Q8N967 370 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 ANKRD42Q8N9B4 389 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 ZNF383Q8NA42 475 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 OR5AN1Q8NGI8 311 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 OR10K1Q8NGX5 313 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 OTOSQ8NHW6 89 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 ZNF502Q8TBZ5 544 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 ST8SIA2Q92186 375 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 GGHQ92820 318 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 ABHD14BQ96IU4 210 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 NEDD4LQ96PU5 975 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 RNF5Q99942 180 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 DPCDQ9BVM2 203 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 KRTAP4-1Q9BYQ7 146 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 NMNAT2Q9BZQ4 307 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 ZNF430Q9H8G1 570 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 NEK6Q9HC98 313 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 OR2S2Q9NQN1 319 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 TVP23BQ9NYZ1 205 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 PSMC3IPQ9P2W1 217 aaPredicted RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 VAX2Q9UIW0 290 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 BAG5Q9UL15 447 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 UTP11Q9Y3A2 253 aaKnown RBP1.94□□□□□ -2.1
VRK3-204ENST00000593912 LY96Q9Y6Y9 160 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
VRK3-204ENST00000593912 TRBV7-1A0A0A6YYK4 115 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 IGHV3-21A0A0B4J1V1 117 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 PLAC8L1A1L4L8 177 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 RBFOX3A6NFN3 312 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 CBY3A6NI87 242 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 LYRM9A8MSI8 78 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 TEX22C9J3V5 150 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 E7EUB6 86 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 K7EMT4 169 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 K7EQG2 157 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 NDUFA4O00483 81 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 EBAG9O00559 213 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 MAGEB4O15481 346 aaPredicted RBP1.93□□□□□ -2.1
VRK3-204ENST00000593912 ST8SIA3O43173 380 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 ATP8B1O43520 1251 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 SNX3O60493 162 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 SRSF10O75494 262 aaKnown RBP1.93□□□□□ -2.1
VRK3-204ENST00000593912 MT-ND4P03905 459 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 AREGP15514 252 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 KRT4P19013 534 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 ASAH1Q13510 395 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 PRSS8Q16651 343 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 CYBRD1Q53TN4 286 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 PSMG4Q5JS54 123 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 C6orf183Q5T699 404 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 SYT6Q5T7P8 510 aaPredicted RBP1.93□□□□□ -2.1
VRK3-204ENST00000593912 GDF5OSQ5U4N7 250 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 DLEU7Q6UYE1 221 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 SHFQ7M4L6 423 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 BCDIN3DQ7Z5W3 292 aaKnown RBP1.93□□□□□ -2.1
VRK3-204ENST00000593912 FUNDC1Q8IVP5 155 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 SLC15A3Q8IY34 581 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 SPC24Q8NBT2 197 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 STXBP6Q8NFX7 210 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 OR2AK2Q8NG84 335 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 OR10H4Q8NGA5 316 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 OR4C16Q8NGL9 310 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 OR8D4Q8NGM9 314 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 OR10AC1Q8NH08 325 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 OR10A6Q8NH74 314 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 NEK7Q8TDX7 302 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 EDARADDQ8WWZ3 215 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 OTULINQ96BN8 352 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 HARBI1Q96MB7 349 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 C7orf50Q9BRJ6 194 aaKnown RBP1.93□□□□□ -2.1
VRK3-204ENST00000593912 LINC00467Q9BRT7 94 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 ZNF446Q9NWS9 450 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 ZNF257Q9Y2Q1 563 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 GMEB1Q9Y692 573 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 KIF25-AS1Q9Y6Z4 181 aa1.93□□□□□ -2.1
VRK3-204ENST00000593912 IGLV11-55A0A075B6I3 123 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 TRAV9-2A0A087WT02 112 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 A0A0D9SG52 128 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 C15orf62A8K5M9 175 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 NPIPB5A8MRT5 1133 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 KRTAP4-16G5E9R7 235 aaPredicted RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 H3BMM0 161 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 J3QRK9 145 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 PHOX2AO14813 284 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 DENRO43583 198 aaKnown RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 NAPSAO96009 420 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 MAS1P04201 325 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 CRYGDP07320 174 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 IL6RP08887 468 aaPredicted RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 CFC1BP0CG36 223 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 IDO1P14902 403 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 ATF1P18846 271 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 AZU1P20160 251 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 GATA2P23769 480 aaPredicted RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms