RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RGS10O43665 173 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 GSTT2P0CG29 244 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 GSTT2BP0CG30 244 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 RRASP10301 218 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 FABP5Q01469 135 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 DYRK1AQ13627 763 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 RTL8BQ17RB0 113 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 MRGPRG-AS1Q2M3A8 158 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 BVESQ8NE79 360 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 SPATA25Q9BR10 227 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 THAP7Q9BT49 309 aaPredicted RBP18.23■□□□□ 0.51
LSM4-202ENST00000593564 COA4Q9NYJ1 87 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 SIGLEC8Q9NYZ4 499 aa18.23■□□□□ 0.51
LSM4-202ENST00000593564 DEFA5Q01523 94 aa18.22■□□□□ 0.51
LSM4-202ENST00000593564 HES5Q5TA89 166 aa18.22■□□□□ 0.51
LSM4-202ENST00000593564 ACOT13Q9NPJ3 140 aa18.22■□□□□ 0.51
LSM4-202ENST00000593564 TNCP24821 2201 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 TRBV12-3P01733 135 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 CSN3P07498 182 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 TATDN3Q17R31 274 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 LCN12Q6JVE5 192 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 TEX45Q8NA69 505 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 ADAD2Q8NCV1 583 aaKnown RBP18.21■□□□□ 0.51
LSM4-202ENST00000593564 PHB2Q99623 299 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 MGLLQ99685 303 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 GAR1Q9NY12 217 aaKnown RBP18.21■□□□□ 0.51
LSM4-202ENST00000593564 ADAM30Q9UKF2 790 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 BIRC6Q9NR09 4857 aa18.21■□□□□ 0.51
LSM4-202ENST00000593564 ERICH4A6NGS2 130 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 MSGN1A6NI15 193 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 MFNGO00587 321 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 AQP4P55087 323 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 UBE2KP61086 200 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 HAGHQ16775 308 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 RPEL1Q2QD12 228 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 VMA21Q3ZAQ7 101 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 Q8N402 240 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 OR10R2Q8NGX6 335 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 DDB2Q92466 427 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 ADTRPQ96IZ2 230 aa18.2■□□□□ 0.5
LSM4-202ENST00000593564 RBMXL2O75526 392 aaKnown RBP18.19■□□□□ 0.5
LSM4-202ENST00000593564 OR2A4O95047 310 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 OR9G9P0C7N8 305 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 GNB3P16520 340 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 GADD45AP24522 165 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 PRSS8Q16651 343 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 PRSS48Q7RTY5 328 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 GTSCR1Q86UQ5 136 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 MAFIPQ8WZ33 124 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 GINS4Q9BRT9 223 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 CCDC90BQ9GZT6 254 aa18.19■□□□□ 0.5
LSM4-202ENST00000593564 ZNF230Q9UIE0 474 aaPredicted RBP18.19■□□□□ 0.5
LSM4-202ENST00000593564 RBM7Q9Y580 266 aaKnown RBP18.19■□□□□ 0.5
LSM4-202ENST00000593564 RAB27BO00194 218 aa18.18■□□□□ 0.5
LSM4-202ENST00000593564 APELAP0DMC3 54 aa18.18■□□□□ 0.5
LSM4-202ENST00000593564 HIST1H1DP16402 221 aaKnown RBP18.18■□□□□ 0.5
LSM4-202ENST00000593564 DUTP33316 252 aaKnown RBP18.18■□□□□ 0.5
LSM4-202ENST00000593564 Q6ZS49 121 aa18.18■□□□□ 0.5
LSM4-202ENST00000593564 SRSF12Q8WXF0 261 aaKnown RBP18.18■□□□□ 0.5
LSM4-202ENST00000593564 SNAPC3Q92966 411 aa18.18■□□□□ 0.5
LSM4-202ENST00000593564 CENPOQ9BU64 300 aa18.18■□□□□ 0.5
LSM4-202ENST00000593564 TUBA4BQ9H853 241 aa18.18■□□□□ 0.5
LSM4-202ENST00000593564 NKX1-2Q9UD57 310 aaPredicted RBP18.18■□□□□ 0.5
LSM4-202ENST00000593564 A0A0B4J203 849 aa18.17■□□□□ 0.5
LSM4-202ENST00000593564 PDCD5O14737 125 aa18.17■□□□□ 0.5
LSM4-202ENST00000593564 CRYZL1O95825 349 aa18.17■□□□□ 0.5
LSM4-202ENST00000593564 RAB6AP20340 208 aa18.17■□□□□ 0.5
LSM4-202ENST00000593564 MAP2K4P45985 399 aa18.17■□□□□ 0.5
LSM4-202ENST00000593564 TNXAQ16473 311 aa18.17■□□□□ 0.5
LSM4-202ENST00000593564 H1FOOQ8IZA3 346 aaPredicted RBP18.17■□□□□ 0.5
LSM4-202ENST00000593564 OSR1Q8TAX0 266 aaPredicted RBP18.17■□□□□ 0.5
LSM4-202ENST00000593564 TRAV1-2A0A0B4J238 106 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 FAM223BA6NKX1 122 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 LINC00473A8K010 186 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 CRHBPP24387 322 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 MECP2P51608 486 aaKnown RBP18.16■□□□□ 0.5
LSM4-202ENST00000593564 OR10A3P58181 314 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 IDO2Q6ZQW0 420 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 FAM223AQ8IWN6 122 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 OR2K2Q8NGT1 345 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 PEMTQ9UBM1 199 aa18.16■□□□□ 0.5
LSM4-202ENST00000593564 A0A075B6Q4 140 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 IZUMO1RA6ND01 250 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 IFITM5A6NNB3 132 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 MPPED1O15442 326 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 AIREO43918 545 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 IFNA6P05013 189 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 RHOGP84095 191 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 NRG4Q8WWG1 115 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 AKIP1Q9NQ31 210 aa18.15■□□□□ 0.5
LSM4-202ENST00000593564 HYDINQ4G0P3 5121 aa18.14■□□□□ 0.49
LSM4-202ENST00000593564 TRBV9A0A0B4J1U6 114 aa18.14■□□□□ 0.49
LSM4-202ENST00000593564 SHISA3A0PJX4 238 aa18.14■□□□□ 0.49
LSM4-202ENST00000593564 BMPR1BO00238 502 aa18.14■□□□□ 0.49
LSM4-202ENST00000593564 CREBL2O60519 120 aaPredicted RBP18.14■□□□□ 0.49
LSM4-202ENST00000593564 TALDO1P37837 337 aa18.14■□□□□ 0.49
LSM4-202ENST00000593564 ACOT12Q8WYK0 555 aa18.14■□□□□ 0.49
LSM4-202ENST00000593564 ZNF430Q9H8G1 570 aaPredicted RBP18.14■□□□□ 0.49
LSM4-202ENST00000593564 METTL21EPA6NDL7 271 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 SAA1P0DJI8 122 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms