RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-211	ENST00000590098	MAFIP	Q8WZ33	124 aa		13.74	□□□□□ -0.21
PRKCSH-211	ENST00000590098	ADTRP	Q96IZ2	230 aa		13.74	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKCSH-211	ENST00000590098	COA4	Q9NYJ1	87 aa		13.74	□□□□□ -0.21
PRKCSH-211	ENST00000590098	PEF1	Q9UBV8	284 aa	Known RBP	13.74	□□□□□ -0.21
PRKCSH-211	ENST00000590098	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKCSH-211	ENST00000590098	METTL21EP	A6NDL7	271 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	IFITM5	A6NNB3	132 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	MFNG	O00587	321 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	BRI3	O95415	125 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	LYL1	P12980	280 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	HIST1H1D	P16402	221 aa	Known RBP	13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	RAB6A	P20340	208 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	OR10A3	P58181	314 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	ARFRP1	Q13795	201 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	KLF5	Q13887	457 aa	Predicted RBP	13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TATDN3	Q17R31	274 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	VMA21	Q3ZAQ7	101 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	ZNF367	Q7RTV3	350 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098		Q8N1Y9	231 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	OR9G4	Q8NGQ1	327 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	USMG5	Q96IX5	58 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	VCX3B	Q9H321	246 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	PALMD	Q9NP74	551 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TNC	P24821	2201 aa		13.73	□□□□□ -0.21
PRKCSH-211	ENST00000590098	MSGN1	A6NI15	193 aa		13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098	SRRM4	A7MD48	611 aa	Known RBP	13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098		H0Y980	276 aa		13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098	RAB27B	O00194	218 aa		13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098	SYNJ2BP	P57105	145 aa		13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TBCE	Q15813	527 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TEX45	Q8NA69	505 aa		13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098	BLOC1S6	Q9UL45	172 aa		13.72	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TENM2	Q9NT68	2774 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	MPPED1	O15442	326 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	APELA	P0DMC3	54 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	RAB3B	P20337	219 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	UBE2K	P61086	200 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	DEFA5	Q01523	94 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	ARL6IP1	Q15041	203 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	SSX1	Q16384	188 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TNXA	Q16473	311 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	ZNF343	Q6P1L6	599 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	C5orf30	Q96GV9	206 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	CITED4	Q96RK1	184 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098	TM2D3	Q9BRN9	247 aa		13.71	□□□□□ -0.21
PRKCSH-211	ENST00000590098		A0A0B4J203	849 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098		A8MZ25	164 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CRYZL1	O95825	349 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	DUT	P33316	252 aa	Known RBP	13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	DYRK1A	Q13627	763 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	PRSS8	Q16651	343 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	RPEL1	Q2QD12	228 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098		Q6ZS49	121 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ACOT12	Q8WYK0	555 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SNAPC3	Q92966	411 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CNBD2	Q96M20	576 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ATG5	Q9H1Y0	275 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	C19orf73	Q9NVV2	129 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	NDUFB11	Q9NX14	153 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	RYR2	Q92736	4967 aa		13.7	□□□□□ -0.22
PRKCSH-211	ENST00000590098	TRDV1	A0A1B0GX56	115 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SHISA3	A0PJX4	238 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ACTL6B	O94805	426 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	OR9G9	P0C7N8	305 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	HSPA13	P48723	471 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	IL34	Q6ZMJ4	242 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	IDO2	Q6ZQW0	420 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ADAD2	Q8NCV1	583 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	OSR1	Q8TAX0	266 aa	Predicted RBP	13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SRSF12	Q8WXF0	261 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	DDB2	Q92466	427 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	DCUN1D5	Q9BTE7	237 aa		13.69	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SACS	Q9NZJ4	4579 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	LINC00473	A8K010	186 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098		J3QRK9	145 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CREBL2	O60519	120 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	TRBV12-3	P01733	135 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	DTYMK	P23919	212 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	MRGPRG-AS1	Q2M3A8	158 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	LCN12	Q6JVE5	192 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	IZUMO2	Q6UXV1	221 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	GTSCR1	Q86UQ5	136 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	GAR1	Q9NY12	217 aa	Known RBP	13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ADAM30	Q9UKF2	790 aa		13.68	□□□□□ -0.22
PRKCSH-211	ENST00000590098	OR2A4	O95047	310 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CSN3	P07498	182 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CTXN2	P0C2S0	81 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	GAL	P22466	123 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	RHOG	P84095	191 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CDNF	Q49AH0	187 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	C22orf42	Q6IC83	251 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098		Q8N402	240 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ZNF645	Q8N7E2	425 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ISOC1	Q96CN7	298 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SPIN2A	Q99865	258 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SPIN2B	Q9BPZ2	258 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ST6GALNAC5	Q9BVH7	336 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	TUBA4B	Q9H853	241 aa		13.67	□□□□□ -0.22

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