RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 FAM71F2Q6NXP2 309 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CD200R1LQ6Q8B3 271 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 TMPRSS11AQ6ZMR5 421 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF554Q86TJ5 538 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 PPP1R27Q86WC6 154 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 ANKRD13BQ86YJ7 626 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 SETD9Q8NE22 299 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 LFNGQ8NES3 379 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 C2CD4CQ8TF44 421 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 IL1F10Q8WWZ1 152 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 GHSRQ92847 366 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 GALMQ96C23 342 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 SLC29A1Q99808 456 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 SULT4A1Q9BR01 284 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 PARP12Q9H0J9 701 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 RETNQ9HD89 108 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 BABAM2Q9NXR7 383 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CNOT2Q9NZN8 540 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 CLEC2DQ9UHP7 191 aa5.95□□□□□ -1.46
SMCHD1-210ENST00000583800 TRBV5-7A0A0A0MS05 114 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 OR5H14A6NHG9 310 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 C9orf118A6NHY6 69 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 H0YJW9 148 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 H7C2Y5 167 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 TRGV3P03979 118 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 GLAP06280 429 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 DCKP27707 260 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 LINC00310P59036 64 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 HAGHQ16775 308 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 AKIRIN2Q53H80 203 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 YIF1BQ5BJH7 314 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 LY6G6FQ5SQ64 297 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 WDR73Q6P4I2 378 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 ABHD14BQ96IU4 210 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 C9orf16Q9BUW7 83 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 SLA2Q9H6Q3 261 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 PIPOXQ9P0Z9 390 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 METTL1Q9UBP6 276 aaKnown RBP5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 RNF150Q9ULK6 438 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 WASHC3Q9Y3C0 194 aa5.94□□□□□ -1.46
SMCHD1-210ENST00000583800 RAB29O14966 203 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 ATP5HO75947 161 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 JTBO76095 146 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 TFAP2AP05549 437 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 MYL12AP19105 171 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 ZP3P21754 424 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 CD40LGP29965 261 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 CAPGP40121 348 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 NHLH2Q02577 135 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 PSG5Q15238 335 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 OR10K2Q6IF99 312 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 C6orf201Q7Z4U5 140 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 DRAXINQ8NBI3 349 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 OR9G4Q8NGQ1 327 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 GRPEL2Q8TAA5 225 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 DERL3Q96Q80 235 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 FAM110AQ9BQ89 295 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 NICN1Q9BSH3 213 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 THAP7Q9BT49 309 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 FAAP24Q9BTP7 215 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 TMED9Q9BVK6 235 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 KCNK15Q9H427 330 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF355PQ9NSJ1 428 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 ABRACLQ9P1F3 81 aa5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 DIMT1Q9UNQ2 313 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 EXOSC1Q9Y3B2 195 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-210ENST00000583800 C13orf42A0A1B0GVH6 325 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 IZUMO1RA6ND01 250 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 DYNC1I1O14576 645 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 ARPC1BO15143 372 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 RBBP9O75884 186 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 TPPPO94811 219 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 MBPP02686 304 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 IGKV1-16P04430 117 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 IFNA6P05013 189 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 MC5RP33032 325 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 SYNJ2BPP57105 145 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 LINC00205P59089 165 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 SSBP2P81877 361 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 FXYD3Q14802 87 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 ZFP1Q6P2D0 407 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF562Q6V9R5 426 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 IL34Q6ZMJ4 242 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 CDH26Q8IXH8 852 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF485Q8NCK3 441 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 OR5T1Q8NG75 326 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 NEDD4LQ96PU5 975 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 AGMATQ9BSE5 352 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 HRH4Q9H3N8 390 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 TUBA4BQ9H853 241 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 CHMP1AQ9HD42 196 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 RANGRFQ9HD47 186 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 OR1A1Q9P1Q5 309 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 LRRC42Q9Y546 428 aa5.92□□□□□ -1.46
SMCHD1-210ENST00000583800 IRGMA1A4Y4 181 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 H0Y980 276 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 H3BUA1 57 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 SLC22A1O15245 554 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 SLC25A17O43808 307 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms