RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 RASL11BQ9BPW5 248 aa17.11■□□□□ 0.33
TSEN54-207ENST00000580013 RSRP1Q9BUV0 290 aa17.11■□□□□ 0.33
TSEN54-207ENST00000580013 PGLYRP1O75594 196 aaPredicted RBP17.1■□□□□ 0.33
TSEN54-207ENST00000580013 RPS16P62249 146 aaKnown RBP17.1■□□□□ 0.33
TSEN54-207ENST00000580013 SRSF4Q08170 494 aaKnown RBP17.1■□□□□ 0.33
TSEN54-207ENST00000580013 SPANXN2Q5MJ10 180 aa17.1■□□□□ 0.33
TSEN54-207ENST00000580013 LINC00299Q6ZSB3 139 aa17.1■□□□□ 0.33
TSEN54-207ENST00000580013 TMEM17Q86X19 198 aa17.1■□□□□ 0.33
TSEN54-207ENST00000580013 Q8N402 240 aa17.1■□□□□ 0.33
TSEN54-207ENST00000580013 C3orf56Q8N813 242 aa17.1■□□□□ 0.33
TSEN54-207ENST00000580013 MRGPRFQ96AM1 343 aa17.1■□□□□ 0.33
TSEN54-207ENST00000580013 CITED1Q99966 193 aa17.1■□□□□ 0.33
TSEN54-207ENST00000580013 FCN1O00602 326 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 TNFSF12O43508 249 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 HLA-DRB1P01911 266 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 IFNA6P05013 189 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 VDAC2P45880 294 aaPredicted RBP17.09■□□□□ 0.33
TSEN54-207ENST00000580013 KLF9Q13886 244 aaPredicted RBP17.09■□□□□ 0.33
TSEN54-207ENST00000580013 RTL8BQ17RB0 113 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 MRGPRG-AS1Q2M3A8 158 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 LIN54Q6MZP7 749 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 OR4C16Q8NGL9 310 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 TERB2Q8NHR7 220 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 TSNAXQ99598 290 aaKnown RBP17.09■□□□□ 0.33
TSEN54-207ENST00000580013 HSPB9Q9BQS6 159 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 FBXL15Q9H469 300 aa17.09■□□□□ 0.33
TSEN54-207ENST00000580013 HAX1O00165 279 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 FCGR3BO75015 233 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 SPDEFO95238 335 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 AKAIN1P0CW23 69 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 MEF2DQ14814 521 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 C9orf152Q5JTZ5 239 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 LPCAT3Q6P1A2 487 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 KCTD9Q7L273 389 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 GDPD1Q8N9F7 314 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 BORCS5Q969J3 196 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 PRELID3BQ9Y3B1 194 aa17.08■□□□□ 0.32
TSEN54-207ENST00000580013 IGHV7-81A0A0B4J1V7 117 aa17.07■□□□□ 0.32
TSEN54-207ENST00000580013 GPR31O00270 319 aa17.07■□□□□ 0.32
TSEN54-207ENST00000580013 PEX14O75381 377 aa17.07■□□□□ 0.32
TSEN54-207ENST00000580013 CRYZL1O95825 349 aa17.07■□□□□ 0.32
TSEN54-207ENST00000580013 FAAP20Q6NZ36 180 aa17.07■□□□□ 0.32
TSEN54-207ENST00000580013 KLHDC1Q8N7A1 406 aa17.07■□□□□ 0.32
TSEN54-207ENST00000580013 OSR1Q8TAX0 266 aaPredicted RBP17.07■□□□□ 0.32
TSEN54-207ENST00000580013 TCTEX1D2Q8WW35 142 aa17.07■□□□□ 0.32
TSEN54-207ENST00000580013 RBFOX2O43251 390 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSEN54-207ENST00000580013 VSIG10L2P0DP72 767 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 ZNF45Q02386 682 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 BAK1Q16611 211 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 SHISA2Q6UWI4 295 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 SLC35E3Q7Z769 313 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 SLC38A6Q8IZM9 456 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 SLC2A8Q9NY64 477 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 KIAA1456Q9P272 454 aa17.06■□□□□ 0.32
TSEN54-207ENST00000580013 SHOXO15266 292 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 IGF1P05019 195 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 EGR2P11161 476 aaPredicted RBP17.05■□□□□ 0.32
TSEN54-207ENST00000580013 KIR2DS2P43631 304 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 TEX45Q8NA69 505 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 OR13C8Q8NGS7 320 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 HARBI1Q96MB7 349 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 NOL4LQ96MY1 436 aaPredicted RBP17.05■□□□□ 0.32
TSEN54-207ENST00000580013 HRASLSQ9HDD0 168 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 AKIP1Q9NQ31 210 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 METTL1Q9UBP6 276 aaKnown RBP17.05■□□□□ 0.32
TSEN54-207ENST00000580013 ZNF580Q9UK33 172 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 PLXNB1O43157 2135 aa17.05■□□□□ 0.32
TSEN54-207ENST00000580013 TRRAPQ9Y4A5 3859 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 DISC1C4P0D8 188 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 SLC25A17O43808 307 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 RAMP3O60896 148 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 UBE2KP61086 200 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 RND3P61587 244 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 SSBP2P81877 361 aaPredicted RBP17.04■□□□□ 0.32
TSEN54-207ENST00000580013 CBX3Q13185 183 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 ZNF585BQ52M93 769 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 OR2B11Q5JQS5 317 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 CMTM1Q8IZ96 169 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 OR4S2Q8NH73 311 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 OR51J1Q9H342 316 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 TPSG1Q9NRR2 321 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 PTTG2Q9NZH5 202 aa17.04■□□□□ 0.32
TSEN54-207ENST00000580013 KCNAB3O43448 404 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 IL6RP08887 468 aaPredicted RBP17.03■□□□□ 0.32
TSEN54-207ENST00000580013 CX3CL1P78423 397 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 PHLDA2Q53GA4 152 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 TCTEX1D4Q5JR98 221 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 C10orf99Q6UWK7 81 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 ZNF562Q6V9R5 426 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 PPP1R27Q86WC6 154 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 SPAG16Q8N0X2 631 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 STPG2Q8N412 459 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 OR51S1Q8NGJ8 323 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 DEDD2Q8WXF8 326 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 ZNF486Q96H40 463 aaPredicted RBP17.03■□□□□ 0.32
TSEN54-207ENST00000580013 LINC00527Q9UJ94 153 aa17.03■□□□□ 0.32
TSEN54-207ENST00000580013 AP4M1O00189 453 aa17.02■□□□□ 0.32
TSEN54-207ENST00000580013 F2RP25116 425 aa17.02■□□□□ 0.32
TSEN54-207ENST00000580013 CRIP2P52943 208 aaPredicted RBP17.02■□□□□ 0.32
TSEN54-207ENST00000580013 NDPQ00604 133 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms