RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 LIN7CQ9NUP9 197 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-208ENST00000566557 ZNF107Q9UII5 783 aaPredicted RBP12.98□□□□□ -0.33
SCAMP2-208ENST00000566557 SHOXO15266 292 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 CD74P04233 296 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 PROK1P58294 105 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 RPL30P62888 115 aaKnown RBP12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 CATR1Q13166 79 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 MEF2DQ14814 521 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 MSMO1Q15800 293 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 AADACL3Q5VUY0 350 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 ZNF66Q6ZN08 573 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 SLC35E3Q7Z769 313 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 Q8N2B8 174 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 MFSD4AQ8N468 514 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 FAM71E2Q8N5Q1 922 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 ZBTB34Q8NCN2 500 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 OR51H1Q8NH63 302 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 WFDC12Q8WWY7 111 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 THAP7Q9BT49 309 aaPredicted RBP12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 PLSCR3Q9NRY6 295 aa12.97□□□□□ -0.33
SCAMP2-208ENST00000566557 VWFP04275 2813 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 DISC1C4P0D8 188 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 RRHO14718 337 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 RLN1P04808 185 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 PTBP1P26599 531 aaKnown RBP eCLIP12.96□□□□□ -0.333e-8■■■■■ 36.8
SCAMP2-208ENST00000566557 S100GP29377 79 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 INPP1P49441 399 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 PHLDA2Q53GA4 152 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 CMTM1Q8IZ96 169 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 OR4C16Q8NGL9 310 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 DDB2Q92466 427 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 CLCC1Q96S66 551 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 SERTAD4Q9NUC0 356 aa12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 METTL1Q9UBP6 276 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-208ENST00000566557 NOTCH1P46531 2555 aa12.96□□□□□ -0.34
SCAMP2-208ENST00000566557 GPR31O00270 319 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 SLC25A17O43808 307 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 NDUFA3O95167 84 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 GNRHRP30968 328 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 ETV6P41212 452 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 PSG5Q15238 335 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 LPCAT3Q6P1A2 487 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 FOXRED2Q8IWF2 684 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 TOMM5Q8N4H5 51 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 NPBQ8NG41 125 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 OR4S2Q8NH73 311 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 RNF5Q99942 180 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 HSPB9Q9BQS6 159 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 SRRQ9GZT4 340 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 MCUBQ9NWR8 336 aa12.95□□□□□ -0.34
SCAMP2-208ENST00000566557 SPDEFO95238 335 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 FAUP35544 74 aaKnown RBP12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 AP3S2P59780 193 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 SRSF4Q08170 494 aaKnown RBP12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 EIF4EBP1Q13541 118 aaPredicted RBP12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 TMEM177Q53S58 311 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 TRIQKQ629K1 86 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 ZNF57Q68EA5 555 aaPredicted RBP12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 SPAG16Q8N0X2 631 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 C11orf44Q8N8P7 122 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 POC5Q8NA72 575 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 ABHD5Q8WTS1 349 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 TRIM63Q969Q1 353 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 PARP11Q9NR21 331 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 PTTG2Q9NZH5 202 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 LINC00527Q9UJ94 153 aa12.94□□□□□ -0.34
SCAMP2-208ENST00000566557 IGHG2P01859 326 aa12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 VMA21Q3ZAQ7 101 aa12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 LIN54Q6MZP7 749 aa12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 CENPVQ7Z7K6 275 aaPredicted RBP12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 LHFPL1Q86WI0 220 aa12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 OSR1Q8TAX0 266 aaPredicted RBP12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 NOL4LQ96MY1 436 aaPredicted RBP12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 RSRP1Q9BUV0 290 aa12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 TPSG1Q9NRR2 321 aa12.93□□□□□ -0.34
SCAMP2-208ENST00000566557 AP4M1O00189 453 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 PGLYRP1O75594 196 aaPredicted RBP12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 CA2P00918 260 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 HLA-DRB1P01911 266 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 ZNF735P0CB33 412 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 PI3P19957 117 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 LGALS7P47929 136 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 UCP3P55916 312 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 KRTAP10-3P60369 221 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 GNB1P62873 340 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 SHISA2Q6UWI4 295 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 GDPD1Q8N9F7 314 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 OR51S1Q8NGJ8 323 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 TERB2Q8NHR7 220 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 MARCH1Q8TCQ1 289 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 PRRT1Q99946 306 aa12.92□□□□□ -0.34
SCAMP2-208ENST00000566557 LINC01548A6NM66 108 aa12.91□□□□□ -0.34
SCAMP2-208ENST00000566557 RAMP3O60896 148 aa12.91□□□□□ -0.34
SCAMP2-208ENST00000566557 IGLV2-23P01705 113 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms