RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	OR51E2	Q9H255	320 aa		4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	VCX	Q9H320	206 aa		4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	FBXL15	Q9H469	300 aa		4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	C12orf4	Q9NQ89	552 aa		4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	TXNL4B	Q9NX01	149 aa	Known RBP	4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	STEAP1	Q9UHE8	339 aa		4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.99	□□□□□ -1.61
TCF4-233	ENST00000566376		V9GY05	133 aa		4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	EPPK1	P58107	5090 aa	Known RBP	4.99	□□□□□ -1.61
TCF4-233	ENST00000566376	VPS13D	Q5THJ4	4388 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	TRBV6-7	A0A0A0MS04	114 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	IGKV1D-13	A0A0B4J2D9	117 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	NCBP2L	A6PVI3	153 aa	Known RBP	4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	SRRM4	A7MD48	611 aa	Known RBP	4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	LINC00473	A8K010	186 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	ARL6IP5	O75915	188 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	GSTT2	P0CG29	244 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	GSTT2B	P0CG30	244 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	IGKV1-13	P0DP09	117 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	HIST1H1D	P16402	221 aa	Known RBP	4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	GNB3	P16520	340 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	PSMA1	P25786	263 aa	Known RBP	4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	IL3RA	P26951	378 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	FGF9	P31371	208 aa	Predicted RBP	4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	SOX6	P35712	828 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	CDX1	P47902	265 aa	Predicted RBP	4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	ARHGDIB	P52566	201 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	PJVK	Q0ZLH3	352 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	TRAM1	Q15629	374 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	ZNF695	Q8IW36	515 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	ZNF491	Q8N8L2	437 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	OR2AK2	Q8NG84	335 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	LGALS14	Q8TCE9	139 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	MRAP	Q8TCY5	172 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	GALM	Q96C23	342 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	NEDD4L	Q96PU5	975 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	CENPO	Q9BU64	300 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	OR51J1	Q9H342	316 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	PLGRKT	Q9HBL7	147 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.98	□□□□□ -1.61	1e-6	■■□□□ 14.2
TCF4-233	ENST00000566376	SDHAF2	Q9NX18	166 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	RDH8	Q9NYR8	311 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	WSB1	Q9Y6I7	421 aa		4.98	□□□□□ -1.61
TCF4-233	ENST00000566376	FRAS1	Q86XX4	4008 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376		A0A1B0GW64	132 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	OR5H14	A6NHG9	310 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	PRSS29P	A6NIE9	313 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	TRIM64C	A6NLI5	447 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	MARCH11	A6NNE9	402 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	CCL24	O00175	119 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	RRH	O14718	337 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	PEX14	O75381	377 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	CA2	P00918	260 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	ELANE	P08246	267 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	PTHLH	P12272	177 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	RAB3B	P20337	219 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	GADD45A	P24522	165 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	RPL30	P62888	115 aa	Known RBP	4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	CX3CL1	P78423	397 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	RUNX1	Q01196	453 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	PSG5	Q15238	335 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	PNLIPRP3	Q17RR3	467 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376		Q6ZS49	121 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	FOXRED2	Q8IWF2	684 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	OR8H1	Q8NGG4	311 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	OR10R2	Q8NGX6	335 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	SETD6	Q8TBK2	473 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	NUDCD2	Q8WVJ2	157 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	C4orf3	Q8WVX3	66 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	CMSS1	Q9BQ75	279 aa	Known RBP	4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	PARP11	Q9NR21	331 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	ZFP57	Q9NU63	452 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	PLEKHJ1	Q9NW61	149 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	C11orf21	Q9P2W6	132 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	RNF150	Q9ULK6	438 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	LSM4	Q9Y4Z0	139 aa	Known RBP	4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	NUBP2	Q9Y5Y2	271 aa		4.97	□□□□□ -1.61
TCF4-233	ENST00000566376	DNAH6	Q9C0G6	4158 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	IGHV4OR15-8	A0A075B7B6	117 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376		A0A087WW49	117 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	TRAV41	A0A0B4J266	112 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	TMEM235	A6NFC5	223 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	TRDC	B7Z8K6	153 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	RAB29	O14966	203 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	FABP7	O15540	132 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	SPDEF	O95238	335 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	GAL	P22466	123 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	PSMB9	P28065	219 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	CEACAM6	P40199	344 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	MYCNOS	P40205	109 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	HSPA13	P48723	471 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	UCP3	P55916	312 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	KIR2DS1	Q14954	304 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	ECSCR	Q19T08	205 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	ZNF260	Q3ZCT1	412 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	C10orf55	Q5SWW7	151 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	SFXN4	Q6P4A7	337 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	TEX38	Q6PEX7	206 aa		4.96	□□□□□ -1.62
TCF4-233	ENST00000566376	ZNF773	Q6PK81	442 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms