RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 H3BUA1 57 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 M0R1X1 148 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 AIREO43918 545 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 TMEM127O75204 238 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 RBMXL2O75526 392 aaKnown RBP12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 ARSBP15848 533 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 ZP3P21754 424 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 CALRP27797 417 aaKnown RBP12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 HAGHQ16775 308 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 MRGPRG-AS1Q2M3A8 158 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 ADAMTSL5Q6ZMM2 481 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 ISOC1Q96CN7 298 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 C5orf30Q96GV9 206 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 PECRQ9BY49 303 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 C12orf4Q9NQ89 552 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 SLC35D1Q9NTN3 355 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 ZNF221Q9UK13 617 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 MGAT4AQ9UM21 535 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 ALMS1Q8TCU4 4167 aa12.8□□□□□ -0.36
HDGFL3-203ENST00000563404 PDCD5O14737 125 aa12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 APOA2P02652 100 aa12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 CD3GP09693 182 aa12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 VEGFCP49767 419 aa12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 SYNJ2BPP57105 145 aa12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 PLA2G7Q13093 441 aa12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 URM1Q9BTM9 101 aaKnown RBP12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 AK6Q9Y3D8 172 aaKnown RBP12.79□□□□□ -0.36
HDGFL3-203ENST00000563404 A0A0G2JLM5 398 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 IZUMO1RA6ND01 250 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 SRRM4A7MD48 611 aaKnown RBP12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 TRDCB7Z8K6 153 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 SLC17A2O00624 439 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 CNIH1O95406 144 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 BRI3O95415 125 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 CSN3P07498 182 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 MYL9P24844 172 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 TMBIM6P55061 237 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 CLDN12P56749 244 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 DYRK1AQ13627 763 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 CMSS1Q9BQ75 279 aaKnown RBP12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 TINAGL1Q9GZM7 467 aaPredicted RBP12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 PLGRKTQ9HBL7 147 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 SDHAF2Q9NX18 166 aa12.78□□□□□ -0.36
HDGFL3-203ENST00000563404 LOC100506127A0A0U1RQW1 187 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 GABARAPO95166 117 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 MOGAT2Q3SYC2 334 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 ZNF343Q6P1L6 599 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 CENPOQ9BU64 300 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 NDUFA13Q9P0J0 144 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 PEF1Q9UBV8 284 aaKnown RBP12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 KCNK7Q9Y2U2 307 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 TNCP24821 2201 aa12.77□□□□□ -0.37
HDGFL3-203ENST00000563404 H0Y980 276 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 APELAP0DMC3 54 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 LGALS7P47929 136 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 RAB11BQ15907 218 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 CTF1Q16619 201 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 IGSF11Q5DX21 431 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 GPR107Q5VW38 600 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 RAB2BQ8WUD1 216 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 HARBI1Q96MB7 349 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 OR2D2Q9H210 308 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 V9GY05 133 aa12.76□□□□□ -0.37
HDGFL3-203ENST00000563404 ZNF701M0R085 212 aaPredicted RBP12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 FABP7O15540 132 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 GSTT2P0CG29 244 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 GSTT2BP0CG30 244 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 RAB3BP20337 219 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 MECP2P51608 486 aaKnown RBP12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 C2orf76Q3KRA6 126 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 CROCCP3Q8IVE0 287 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 BVESQ8NE79 360 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 OR4A4PQ8NGN8 299 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 CABLES2Q9BTV7 478 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 RETNQ9HD89 108 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 COA4Q9NYJ1 87 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
HDGFL3-203ENST00000563404 SMIM31A0A1B0GVY4 71 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 SHISA3A0PJX4 238 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 MSGN1A6NI15 193 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 NOTOA8MTQ0 251 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 BET1O15155 118 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 AADACP22760 399 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 SDC2P34741 201 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 ADAD2Q8NCV1 583 aaKnown RBP12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 OR56B1Q8NGI3 324 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 MAFIPQ8WZ33 124 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 FAM3DQ96BQ1 224 aa12.74□□□□□ -0.37
HDGFL3-203ENST00000563404 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 TMEM272A0A1B0GTI8 110 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 IFITM5A6NNB3 132 aa12.73□□□□□ -0.37
HDGFL3-203ENST00000563404 SHOXO15266 292 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms