RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ISOC1Q96CN7 298 aa12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 PEF1Q9UBV8 284 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 V9GY05 133 aa12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 H0Y980 276 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 SHOXO15266 292 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 CSN3P07498 182 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 AADACP22760 399 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 PSMA1P25786 263 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 AQP4P55087 323 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 HAGHQ16775 308 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 DDB2Q92466 427 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RAB3CQ96E17 227 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 COA4Q9NYJ1 87 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ZNF230Q9UIE0 474 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RAB22AQ9UL26 194 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 TPRKBQ9Y3C4 175 aa12.7□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 MSGN1A6NI15 193 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 MFNGO00587 321 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RGS10O43665 173 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 GNB3P16520 340 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 MRPS15P82914 257 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ADAD2Q8NCV1 583 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 USMG5Q96IX5 58 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 PHB2Q99623 299 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 SIGLEC8Q9NYZ4 499 aa12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 NKX1-2Q9UD57 310 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 SHISA3A0PJX4 238 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 LINC00473A8K010 186 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 DIRAS3O95661 229 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 MAP2K4P45985 399 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 OR10A3P58181 314 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 TAGLNQ01995 201 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 CBX3Q13185 183 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RTL8BQ17RB0 113 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 IDO2Q6ZQW0 420 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 OR10R2Q8NGX6 335 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 NRG4Q8WWG1 115 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 MGLLQ99685 303 aa12.68□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 A0A075B6Q4 140 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ANKRD65E5RJM6 399 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RAB27BO00194 218 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 OR2A4O95047 310 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 PRH1P02810 166 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RRASP10301 218 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 MECP2P51608 486 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 PSMD7P51665 324 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 UBE2KP61086 200 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ZNF45Q02386 682 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 TNXAQ16473 311 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 PRSS8Q16651 343 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RPEL1Q2QD12 228 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 GTSCR1Q86UQ5 136 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 Q8N402 240 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 TEX45Q8NA69 505 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 SRSF12Q8WXF0 261 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 CCDC90BQ9GZT6 254 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ACOT13Q9NPJ3 140 aa12.67□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 CRYZL1O95825 349 aa12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 OR9G9P0C7N8 305 aa12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 HIST1H1DP16402 221 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 CRHBPP24387 322 aa12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 PRSS48Q7RTY5 328 aa12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 H1FOOQ8IZA3 346 aaPredicted RBP12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 GINS4Q9BRT9 223 aa12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 AKIP1Q9NQ31 210 aa12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RBM7Q9Y580 266 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 PLECQ15149 4684 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 A0A0B4J203 849 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 IFITM5A6NNB3 132 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 BMPR1BO00238 502 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 GADD45AP24522 165 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RANBP1P43487 201 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RHOGP84095 191 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 SSX1Q16384 188 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 TATDN3Q17R31 274 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ACOT12Q8WYK0 555 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 SNAPC3Q92966 411 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ADTRPQ96IZ2 230 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 TUBA4BQ9H853 241 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 RETNQ9HD89 108 aa12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-AS1-201ENST00000562298 TRBV9A0A0B4J1U6 114 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 TRAV1-2A0A0B4J238 106 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 FAM223BA6NKX1 122 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 MPPED1O15442 326 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 SAA1P0DJI8 122 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 RAB6AP20340 208 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 EXOSC2Q13868 293 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 C10orf55Q5SWW7 151 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 LINC00322Q6ZN03 302 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 Q6ZS49 121 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 FAM223AQ8IWN6 122 aa12.64□□□□□ -0.39
VPS9D1-AS1-201ENST00000562298 OSR1Q8TAX0 266 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms