RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PALMDQ9NP74 551 aa20.69■□□□□ 0.9
SNRPA1-215ENST00000561187 TRBV6-7A0A0A0MS04 114 aa20.68■□□□□ 0.9
SNRPA1-215ENST00000561187 H3BUA1 57 aa20.68■□□□□ 0.9
SNRPA1-215ENST00000561187 RTL8BQ17RB0 113 aa20.68■□□□□ 0.9
SNRPA1-215ENST00000561187 ZFAND6Q6FIF0 208 aa20.68■□□□□ 0.9
SNRPA1-215ENST00000561187 Q8N1Y9 231 aa20.68■□□□□ 0.9
SNRPA1-215ENST00000561187 ACOT13Q9NPJ3 140 aa20.68■□□□□ 0.9
SNRPA1-215ENST00000561187 A0A0G2JLM5 398 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 MFNGO00587 321 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 GADD45AP24522 165 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 LGALS7P47929 136 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 ARFRP1Q13795 201 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 TNXAQ16473 311 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 SGPP2Q8IWX5 399 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 OR9G4Q8NGQ1 327 aa20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 TINAGL1Q9GZM7 467 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 ELF5Q9UKW6 265 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-215ENST00000561187 IGKV1D-8A0A087WSZ0 117 aa20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 RBMXL2O75526 392 aaKnown RBP20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 CRYZL1O95825 349 aa20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 LYL1P12980 280 aa20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 HIST1H1DP16402 221 aaKnown RBP20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 DYRK1AQ13627 763 aa20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 TMEM177Q53S58 311 aa20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 CNBD2Q96M20 576 aa20.66■□□□□ 0.9
SNRPA1-215ENST00000561187 TNCP24821 2201 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 RAB27BO00194 218 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 PDCD5O14737 125 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 MPPED1O15442 326 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 PRH1P02810 166 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 MYL9P24844 172 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 PSMD7P51665 324 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 TAGLNQ01995 201 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 KLF5Q13887 457 aaPredicted RBP20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 MRGPRG-AS1Q2M3A8 158 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 ZNF367Q7RTV3 350 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 ACOT12Q8WYK0 555 aa20.65■□□□□ 0.9
SNRPA1-215ENST00000561187 MSGN1A6NI15 193 aa20.64■□□□□ 0.89
SNRPA1-215ENST00000561187 IFITM5A6NNB3 132 aa20.64■□□□□ 0.89
SNRPA1-215ENST00000561187 LINC00473A8K010 186 aa20.64■□□□□ 0.89
SNRPA1-215ENST00000561187 TALDO1P37837 337 aa20.64■□□□□ 0.89
SNRPA1-215ENST00000561187 TM2D3Q9BRN9 247 aa20.64■□□□□ 0.89
SNRPA1-215ENST00000561187 PEF1Q9UBV8 284 aaKnown RBP20.64■□□□□ 0.89
SNRPA1-215ENST00000561187 TBCEQ15813 527 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-215ENST00000561187 VMA21Q3ZAQ7 101 aa20.63■□□□□ 0.89
SNRPA1-215ENST00000561187 OR2B11Q5JQS5 317 aa20.63■□□□□ 0.89
SNRPA1-215ENST00000561187 IZUMO2Q6UXV1 221 aa20.63■□□□□ 0.89
SNRPA1-215ENST00000561187 IL34Q6ZMJ4 242 aa20.63■□□□□ 0.89
SNRPA1-215ENST00000561187 RAB3BP20337 219 aa20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 DUTP33316 252 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 RPEL1Q2QD12 228 aa20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 C10orf55Q5SWW7 151 aa20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 C22orf42Q6IC83 251 aa20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 H1FOOQ8IZA3 346 aaPredicted RBP20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 SRSF12Q8WXF0 261 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 ATG5Q9H1Y0 275 aa20.62■□□□□ 0.89
SNRPA1-215ENST00000561187 AADACP22760 399 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 RANBP1P43487 201 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 PRSS8Q16651 343 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 ZNF343Q6P1L6 599 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 NR2C2APQ86WQ0 139 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 ADAD2Q8NCV1 583 aaKnown RBP20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 DDB2Q92466 427 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 TMEM68Q96MH6 324 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 CITED4Q96RK1 184 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 C19orf73Q9NVV2 129 aa20.61■□□□□ 0.89
SNRPA1-215ENST00000561187 TRAV1-2A0A0B4J238 106 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 IZUMO1RA6ND01 250 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 RRASP10301 218 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 RAB6AP20340 208 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 UBE2KP61086 200 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 DCUN1D5Q9BTE7 237 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 NDUFB11Q9NX14 153 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 CSMD3Q7Z407 3707 aa20.6■□□□□ 0.89
SNRPA1-215ENST00000561187 LYSTQ99698 3801 aa20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 METTL21EPA6NDL7 271 aa20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 CSN3P07498 182 aa20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 OR9G9P0C7N8 305 aa20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 SAA1P0DJI8 122 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 RHOGP84095 191 aa20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 EXOSC2Q13868 293 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 ZNF430Q9H8G1 570 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-215ENST00000561187 H0Y980 276 aa20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 FCGR3BO75015 233 aa20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 NFYAP23511 347 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 TEX45Q8NA69 505 aa20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 USMG5Q96IX5 58 aa20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 ADTRPQ96IZ2 230 aa20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 ST6GALNAC5Q9BVH7 336 aa20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 AKIP1Q9NQ31 210 aa20.58■□□□□ 0.89
SNRPA1-215ENST00000561187 DIRAS3O95661 229 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 ZNF45Q02386 682 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 C19orf35Q6ZS72 473 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 GTSCR1Q86UQ5 136 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 VKORC1L1Q8N0U8 176 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 NUDCD2Q8WVJ2 157 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 ISOC1Q96CN7 298 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 TUBA4BQ9H853 241 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 BLOC1S6Q9UL45 172 aa20.57■□□□□ 0.88
SNRPA1-215ENST00000561187 TRDV1A0A1B0GX56 115 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms