RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 GALP22466 123 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 TNXAQ16473 311 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 SRSF7Q16629 238 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNX1-209ENST00000559961 TMEM177Q53S58 311 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 TEX45Q8NA69 505 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 ACOT12Q8WYK0 555 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 CABLES2Q9BTV7 478 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 ST6GALNAC5Q9BVH7 336 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 NDUFB11Q9NX14 153 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 RAB26Q9ULW5 256 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 MRPS7Q9Y2R9 242 aaKnown RBP9.7□□□□□ -0.86
SNX1-209ENST00000559961 TUSC2O75896 110 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 CRYZL1O95825 349 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 DTYMKP23919 212 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 GNG2P59768 71 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 UBE2KP61086 200 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 SSX1Q16384 188 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 RPEL1Q2QD12 228 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 CDNFQ49AH0 187 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 FAM209BQ5JX69 171 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 C22orf42Q6IC83 251 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 OVCH2Q7RTZ1 564 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 GTSCR1Q86UQ5 136 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 SLC25A42Q86VD7 318 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 OSR1Q8TAX0 266 aaPredicted RBP9.69□□□□□ -0.86
SNX1-209ENST00000559961 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 SNAPC3Q92966 411 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 SPIN2AQ99865 258 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 SPIN2BQ9BPZ2 258 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 TINAGL1Q9GZM7 467 aaPredicted RBP9.69□□□□□ -0.86
SNX1-209ENST00000559961 PEMTQ9UBM1 199 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 PEF1Q9UBV8 284 aaKnown RBP9.69□□□□□ -0.86
SNX1-209ENST00000559961 ZNF230Q9UIE0 474 aaPredicted RBP9.69□□□□□ -0.86
SNX1-209ENST00000559961 SSR3Q9UNL2 185 aa9.69□□□□□ -0.86
SNX1-209ENST00000559961 DNAH3Q8TD57 4116 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 DPPA5A6NC42 116 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 MSGN1A6NI15 193 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 MFNGO00587 321 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 PROP1O75360 226 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 FRMD6-AS1P0C7T7 363 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 PSMB9P28065 219 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 OR10A3P58181 314 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 LINC00205P59089 165 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 GABARAPL2P60520 117 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 ATP5G2Q06055 141 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 TPRA1Q86W33 373 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 FCGR1BQ92637 280 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 RCHY1Q96PM5 261 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 DCSTAMPQ9H295 470 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 TUBA4BQ9H853 241 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 TPSG1Q9NRR2 321 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 KCNK7Q9Y2U2 307 aa9.68□□□□□ -0.86
SNX1-209ENST00000559961 NOTOA8MTQ0 251 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 J3QRK9 145 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 RAB27BO00194 218 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 FCGR3BO75015 233 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 BRI3O95415 125 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 IGLV2-23P01705 113 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 OR9G9P0C7N8 305 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 SYNJ2BPP57105 145 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 PJVKQ0ZLH3 352 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 PRSS8Q16651 343 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 Q6ZS49 121 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 MMD2Q8IY49 270 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 ZNF645Q8N7E2 425 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 OR9G4Q8NGQ1 327 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 VSTM2AQ8TAG5 236 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 AIFM2Q9BRQ8 373 aa9.67□□□□□ -0.86
SNX1-209ENST00000559961 FAM223BA6NKX1 122 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 AIREO43918 545 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 DHFRP00374 187 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 IFNA6P05013 189 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 APELAP0DMC3 54 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 LYL1P12980 280 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 DUTP33316 252 aaKnown RBP9.66□□□□□ -0.86
SNX1-209ENST00000559961 ARPC4P59998 168 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 PLA2G7Q13093 441 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 KLF5Q13887 457 aaPredicted RBP9.66□□□□□ -0.86
SNX1-209ENST00000559961 HACD4Q5VWC8 232 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 CNIH2Q6PI25 160 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 KCTD9Q7L273 389 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 FAM223AQ8IWN6 122 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 H1FOOQ8IZA3 346 aaPredicted RBP9.66□□□□□ -0.86
SNX1-209ENST00000559961 MUC7Q8TAX7 377 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 YTHDF1Q9BYJ9 559 aaKnown RBP9.66□□□□□ -0.86
SNX1-209ENST00000559961 DAPK2Q9UIK4 370 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 OR2W1Q9Y3N9 320 aa9.66□□□□□ -0.86
SNX1-209ENST00000559961 TRIM64CA6NLI5 447 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 CRYGBP07316 175 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 CDK10Q15131 360 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 ZNF343Q6P1L6 599 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 Q8N402 240 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 OR4S2Q8NH73 311 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 TCTEX1D2Q8WW35 142 aa9.65□□□□□ -0.86
SNX1-209ENST00000559961 SRSF12Q8WXF0 261 aaKnown RBP9.65□□□□□ -0.86
SNX1-209ENST00000559961 HSD17B10Q99714 261 aaKnown RBP9.65□□□□□ -0.86
SNX1-209ENST00000559961 RRP15Q9Y3B9 282 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms