RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 GNB1P62873 340 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 ACSM6Q6P461 480 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 SSUH2Q9Y2M2 353 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 HRASP01112 189 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 LRRC75BQ2VPJ9 315 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 FAM53AQ6NSI3 398 aaPredicted RBP13.04□□□□□ -0.32
AP4E1-202ENST00000558439 Q6ZT83 130 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 CCL13Q99616 98 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 PARLQ9H300 379 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 MANBALQ9NQG1 85 aa13.04□□□□□ -0.32
AP4E1-202ENST00000558439 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
AP4E1-202ENST00000558439 THBS3P49746 956 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 QTRT1Q9BXR0 403 aaKnown RBP13.03□□□□□ -0.32
AP4E1-202ENST00000558439 ZNF71Q9NQZ8 489 aaPredicted RBP13.03□□□□□ -0.32
AP4E1-202ENST00000558439 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 FAM209BQ5JX69 171 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 GGACTQ9BVM4 153 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 EGLN1Q9GZT9 426 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 NTF3P20783 257 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 TNFSF10P50591 281 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 TCL1AP56279 114 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 ERHP84090 104 aaKnown RBP13.03□□□□□ -0.32
AP4E1-202ENST00000558439 SLC35D1Q9NTN3 355 aa13.03□□□□□ -0.32
AP4E1-202ENST00000558439 PTBP3O95758 552 aaKnown RBP13.02□□□□□ -0.32
AP4E1-202ENST00000558439 IGKV1-5P01602 117 aa13.02□□□□□ -0.32
AP4E1-202ENST00000558439 FTH1P19P0C7X4 201 aa13.02□□□□□ -0.32
AP4E1-202ENST00000558439 LRP11Q86VZ4 500 aa13.02□□□□□ -0.32
AP4E1-202ENST00000558439 GSN-AS1Q9NRJ2 163 aa13.02□□□□□ -0.32
AP4E1-202ENST00000558439 APELAP0DMC3 54 aa13.02□□□□□ -0.32
AP4E1-202ENST00000558439 CDX1P47902 265 aaPredicted RBP13.02□□□□□ -0.32
AP4E1-202ENST00000558439 TMEM68Q96MH6 324 aa13.02□□□□□ -0.32
AP4E1-202ENST00000558439 CTDSP1Q9GZU7 261 aa13.02□□□□□ -0.32
AP4E1-202ENST00000558439 CXCL1P09341 107 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 NPY1RP25929 384 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 PSG5Q15238 335 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 TRAT1Q6PIZ9 186 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 ACP7Q6ZNF0 438 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 ZNF497Q6ZNH5 498 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 SGMS2Q8NHU3 365 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 SH2D2AQ9NP31 389 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 MGST3O14880 152 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 RHOBP62745 196 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 SRSF6Q13247 344 aaKnown RBP13.02□□□□□ -0.33
AP4E1-202ENST00000558439 RNFT1Q5M7Z0 435 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 CORO2AQ92828 525 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 BTF3L4Q96K17 158 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 PXMP4Q9Y6I8 212 aa13.02□□□□□ -0.33
AP4E1-202ENST00000558439 PRR33A8MZF0 331 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 HPRT1P00492 218 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 C9orf106Q8NAJ2 232 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 GATAD1Q8WUU5 269 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 TUBA4BQ9H853 241 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 TRANK1O15050 2925 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 RAB7AP51149 207 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 COLCA1Q6ZS62 124 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 OR51M1Q9H341 326 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 TOX4O94842 621 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 CD59P13987 128 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
AP4E1-202ENST00000558439 PSMG3Q9BT73 122 aaPredicted RBP13.01□□□□□ -0.33
AP4E1-202ENST00000558439 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 RPL30P62888 115 aaKnown RBP13□□□□□ -0.33
AP4E1-202ENST00000558439 SLC35B1P78383 322 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 PCSK4Q6UW60 755 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 SPNS3Q6ZMD2 512 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 GUCD1Q96NT3 240 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 PITPNC1Q9UKF7 332 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 A0A087X0M5 115 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 A0A1B0GX30 115 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 C5orf52A6NGY3 159 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 RAB29O14966 203 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 TAS2R45P59539 299 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 ERVFRD-1P60508 538 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 OR10G8Q8NGN5 311 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 RNF7Q9UBF6 113 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 ELOA3CA0A087WX78 387 aaPredicted RBP13□□□□□ -0.33
AP4E1-202ENST00000558439 ELOBQ15370 118 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 GFI1BQ5VTD9 330 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 SLC35E4Q6ICL7 350 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 FAM216AQ8WUB2 273 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 LURAP1Q96LR2 239 aa13□□□□□ -0.33
AP4E1-202ENST00000558439 ZNF891A8MT65 544 aaPredicted RBP12.99□□□□□ -0.33
AP4E1-202ENST00000558439 FCN1O00602 326 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 OPRK1P41145 380 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 CASP6P55212 293 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 FOXF2Q12947 444 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 SPSB3Q6PJ21 355 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 DAZAP1Q96EP5 407 aaKnown RBP12.99□□□□□ -0.33
AP4E1-202ENST00000558439 MEGF10Q96KG7 1140 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 TMEM140Q9NV12 185 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 CACNA1BQ00975 2339 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 TECTAO75443 2155 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 MKRN2OSH3BPM6 223 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 J3QR06 171 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 IGHV3-48P01763 117 aa12.99□□□□□ -0.33
AP4E1-202ENST00000558439 TNFRSF1AP19438 455 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms