RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ACTBL2Q562R1 376 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 OR2B11Q5JQS5 317 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 PRR31Q5SQ13 230 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 ZNF66Q6ZN08 573 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 MFSD4AQ8N468 514 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 ZBTB34Q8NCN2 500 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 OR6F1Q8NGZ6 308 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 MOB3AQ96BX8 217 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 CLCC1Q96S66 551 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 MMP27Q9H306 513 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 OR51J1Q9H342 316 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 PARP11Q9NR21 331 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 RABL2AQ9UBK7 228 aaPredicted RBP9.74□□□□□ -0.85
SMAD3-205ENST00000558428 MTFP1Q9UDX5 166 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 RABL2BQ9UNT1 228 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 TCRBV4S1A1TA0A5B7 111 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 M0QYG6 137 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 ATP6V0E1O15342 81 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 IGLV2-23P01705 113 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 CSF1P09603 554 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 VDAC1P21796 283 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 TNFSF8P32971 234 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 CD83Q01151 205 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 EIF4EBP1Q13541 118 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-205ENST00000558428 KHDC1LQ5JSQ8 128 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 ZNF818PQ6ZRF7 136 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 NDUFA11Q86Y39 141 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 OSR1Q8TAX0 266 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-205ENST00000558428 SMIM4Q8WVI0 70 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 BORCS5Q969J3 196 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 GPHA2Q96T91 129 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 GON7Q9BXV9 100 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 FXYD6Q9H0Q3 95 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 TPSG1Q9NRR2 321 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 PKD1L1Q8TDX9 2849 aa9.73□□□□□ -0.85
SMAD3-205ENST00000558428 VWFP04275 2813 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 MGAM2Q2M2H8 2515 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 A0A1W2PRX2 142 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 DPPA5A6NC42 116 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 FABP12A6NFH5 140 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
SMAD3-205ENST00000558428 FCN1O00602 326 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 CTDSPLO15194 276 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 TSPAN15O95858 294 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 CA2P00918 260 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 OPN1MWP04001 364 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 CD3DP04234 171 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 IFNA6P05013 189 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 IGF1P05019 195 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 OPN1MW2P0DN77 364 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 OPN1MW3P0DN78 364 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 GNRHRP30968 328 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 S100A5P33763 92 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 KIR2DS2P43631 304 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 TAS2R19P59542 299 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 CX3CL1P78423 397 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 NDPQ00604 133 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 CATR1Q13166 79 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 VMA21Q3ZAQ7 101 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 RNASE10Q5GAN6 216 aaKnown RBP9.72□□□□□ -0.85
SMAD3-205ENST00000558428 TCTEX1D4Q5JR98 221 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 VAX1Q5SQQ9 334 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 COMMD1Q8N668 190 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 TMEM229BQ8NBD8 167 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 OR4S2Q8NH73 311 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 ABHD5Q8WTS1 349 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 DGCR14Q96DF8 476 aaKnown RBP9.72□□□□□ -0.85
SMAD3-205ENST00000558428 TINAGL1Q9GZM7 467 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-205ENST00000558428 NDUFA13Q9P0J0 144 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 A3GALT2U3KPV4 340 aa9.72□□□□□ -0.85
SMAD3-205ENST00000558428 TBPP20226 339 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 SSBP1Q04837 148 aaKnown RBP9.71□□□□□ -0.86
SMAD3-205ENST00000558428 AADACL3Q5VUY0 350 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 TEX38Q6PEX7 206 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 TREML4Q6UXN2 200 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 PPP1R27Q86WC6 154 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 OR51H1Q8NH63 302 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 ZNF580Q9UK33 172 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 TSSC4Q9Y5U2 329 aaPredicted RBP9.71□□□□□ -0.86
SMAD3-205ENST00000558428 WSB1Q9Y6I7 421 aa9.71□□□□□ -0.86
SMAD3-205ENST00000558428 TRAV41A0A0B4J266 112 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 G3V318 75 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 GPR31O00270 319 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 RAB3DO95716 219 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 CD74P04233 296 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 CRYGBP07316 175 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-205ENST00000558428 BRWD1-AS2P59051 145 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 UBE2KP61086 200 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 GNB1P62873 340 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 ECSCRQ19T08 205 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 FOXB2Q5VYV0 432 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 STEAP1BQ6NZ63 245 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 LPCAT3Q6P1A2 487 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 ZNF562Q6V9R5 426 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 CMTM1Q8IZ96 169 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 SPAG16Q8N0X2 631 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 ARRDC1Q8N5I2 433 aa9.7□□□□□ -0.86
SMAD3-205ENST00000558428 TEX45Q8NA69 505 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms