RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SRRQ9GZT4 340 aa20.26■□□□□ 0.83
SMAD6-202ENST00000557916 FCGR3BO75015 233 aa20.25■□□□□ 0.83
SMAD6-202ENST00000557916 C5orf64Q2M2E5 130 aa20.25■□□□□ 0.83
SMAD6-202ENST00000557916 TMEM177Q53S58 311 aa20.25■□□□□ 0.83
SMAD6-202ENST00000557916 OR2B11Q5JQS5 317 aa20.25■□□□□ 0.83
SMAD6-202ENST00000557916 FAAP20Q6NZ36 180 aa20.25■□□□□ 0.83
SMAD6-202ENST00000557916 WFDC12Q8WWY7 111 aa20.25■□□□□ 0.83
SMAD6-202ENST00000557916 ZNF747Q9BV97 191 aa20.25■□□□□ 0.83
SMAD6-202ENST00000557916 DISC1C4P0D8 188 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 GPR31O00270 319 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 RRHO14718 337 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 CRYZL1O95825 349 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 ZNF735P0CB33 412 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 LGALS7P47929 136 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 UCP3P55916 312 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 PSG5Q15238 335 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 SCGB2B2Q4G0G5 96 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 LHFPL1Q86WI0 220 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 CMTM1Q8IZ96 169 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 OR4C16Q8NGL9 310 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 TRIM63Q969Q1 353 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 HARBI1Q96MB7 349 aa20.24■□□□□ 0.83
SMAD6-202ENST00000557916 SHOXO15266 292 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 IGHG2P01859 326 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 VSIG10L2P0DP72 767 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 PLGLAQ15195 96 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 SLC35E3Q7Z769 313 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 KLHDC1Q8N7A1 406 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 TERB2Q8NHR7 220 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 RSRP1Q9BUV0 290 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 FBXL15Q9H469 300 aa20.23■□□□□ 0.83
SMAD6-202ENST00000557916 DNHD1Q96M86 4753 aa20.22■□□□□ 0.83
SMAD6-202ENST00000557916 SPDEFO95238 335 aa20.22■□□□□ 0.83
SMAD6-202ENST00000557916 CATR1Q13166 79 aa20.22■□□□□ 0.83
SMAD6-202ENST00000557916 LIN54Q6MZP7 749 aa20.22■□□□□ 0.83
SMAD6-202ENST00000557916 SLC38A6Q8IZM9 456 aa20.22■□□□□ 0.83
SMAD6-202ENST00000557916 GDPD1Q8N9F7 314 aa20.22■□□□□ 0.83
SMAD6-202ENST00000557916 PTTG2Q9NZH5 202 aa20.22■□□□□ 0.83
SMAD6-202ENST00000557916 METTL1Q9UBP6 276 aaKnown RBP20.22■□□□□ 0.83
SMAD6-202ENST00000557916 PGLYRP1O75594 196 aaPredicted RBP20.21■□□□□ 0.83
SMAD6-202ENST00000557916 KIR2DS2P43631 304 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 BRWD1-AS2P59051 145 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 AP3S2P59780 193 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 ZNF45Q02386 682 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 TOMM5Q8N4H5 51 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 OR51H1Q8NH63 302 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 OR4S2Q8NH73 311 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 OSR1Q8TAX0 266 aaPredicted RBP20.21■□□□□ 0.83
SMAD6-202ENST00000557916 HSPB9Q9BQS6 159 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 WNT10AQ9GZT5 417 aa20.21■□□□□ 0.83
SMAD6-202ENST00000557916 LINC01548A6NM66 108 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 SRRM4A7MD48 611 aaKnown RBP20.2■□□□□ 0.82
SMAD6-202ENST00000557916 SLC25A17O43808 307 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 IGLV2-23P01705 113 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 HLA-DRB1P01911 266 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 RLN1P04808 185 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 PGAM2P15259 253 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 PPP5CP53041 499 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 KRTAP10-3P60369 221 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 KLF9Q13886 244 aaPredicted RBP20.2■□□□□ 0.82
SMAD6-202ENST00000557916 PHLDA2Q53GA4 152 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 LINC00299Q6ZSB3 139 aa20.2■□□□□ 0.82
SMAD6-202ENST00000557916 KCNAB3O43448 404 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 S100GP29377 79 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 SRSF4Q08170 494 aaKnown RBP20.19■□□□□ 0.82
SMAD6-202ENST00000557916 SPAG16Q8N0X2 631 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 ANK2Q01484 3957 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 SHISA2Q6UWI4 295 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 FOXRED2Q8IWF2 684 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 POC5Q8NA72 575 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 OR51S1Q8NGJ8 323 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 PRRT1Q99946 306 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 MCUBQ9NWR8 336 aa20.19■□□□□ 0.82
SMAD6-202ENST00000557916 FCN1O00602 326 aa20.18■□□□□ 0.82
SMAD6-202ENST00000557916 RAMP3O60896 148 aa20.18■□□□□ 0.82
SMAD6-202ENST00000557916 FAUP35544 74 aaKnown RBP20.18■□□□□ 0.82
SMAD6-202ENST00000557916 BAK1Q16611 211 aa20.18■□□□□ 0.82
SMAD6-202ENST00000557916 CENPVQ7Z7K6 275 aaPredicted RBP20.18■□□□□ 0.82
SMAD6-202ENST00000557916 MARCH1Q8TCQ1 289 aa20.18■□□□□ 0.82
SMAD6-202ENST00000557916 ZNF486Q96H40 463 aaPredicted RBP20.18■□□□□ 0.82
SMAD6-202ENST00000557916 NOL4LQ96MY1 436 aaPredicted RBP20.18■□□□□ 0.82
SMAD6-202ENST00000557916 CLCC1Q96S66 551 aa20.18■□□□□ 0.82
SMAD6-202ENST00000557916 SDHCQ99643 169 aaPredicted RBP20.18■□□□□ 0.82
SMAD6-202ENST00000557916 LINC00527Q9UJ94 153 aa20.18■□□□□ 0.82
SMAD6-202ENST00000557916 IGHV7-81A0A0B4J1V7 117 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 AP4M1O00189 453 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 RBFOX2O43251 390 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMAD6-202ENST00000557916 CRYGBP07316 175 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 ECI1P42126 302 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 VMA21Q3ZAQ7 101 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 TRIQKQ629K1 86 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 ZNF57Q68EA5 555 aaPredicted RBP20.17■□□□□ 0.82
SMAD6-202ENST00000557916 ZFAND1Q8TCF1 268 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 CD300LFQ8TDQ1 290 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 MRGPRFQ96AM1 343 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 HRASLSQ9HDD0 168 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 AKIP1Q9NQ31 210 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 SLC2A9Q9NRM0 540 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 TPSG1Q9NRR2 321 aa20.17■□□□□ 0.82
SMAD6-202ENST00000557916 SCP2D1Q9UJQ7 156 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms