RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 KIAA1456Q9P272 454 aa11.77□□□□□ -0.53
VIPAS39-210ENST00000557466 RRHO14718 337 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 FCGR3BO75015 233 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 CRYZL1O95825 349 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 IGLV2-23P01705 113 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 RRASP10301 218 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 PPP5CP53041 499 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 UCP3P55916 312 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 KRTAP10-3P60369 221 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 CBX3Q13185 183 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 C5orf64Q2M2E5 130 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 SCGB2B2Q4G0G5 96 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 TMEM177Q53S58 311 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 BORCS5Q969J3 196 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 HARBI1Q96MB7 349 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 SDHCQ99643 169 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 RNF5Q99942 180 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 HSPB9Q9BQS6 159 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 PRELID3BQ9Y3B1 194 aa11.76□□□□□ -0.53
VIPAS39-210ENST00000557466 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 GPR31O00270 319 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 SHOXO15266 292 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 SPDEFO95238 335 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 IGHG2P01859 326 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 RLN1P04808 185 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 BRWD1-AS2P59051 145 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 CATR1Q13166 79 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 PSG5Q15238 335 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 PHLDA2Q53GA4 152 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 SLC35E3Q7Z769 313 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 SLC38A6Q8IZM9 456 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 KLHDC1Q8N7A1 406 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 C3orf56Q8N813 242 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 GDPD1Q8N9F7 314 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 MRGPRFQ96AM1 343 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 AKIP1Q9NQ31 210 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 TPSG1Q9NRR2 321 aa11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 METTL1Q9UBP6 276 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-210ENST00000557466 LINC01548A6NM66 108 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 SRRM4A7MD48 611 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 SLC25A17O43808 307 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 HLA-DRB1P01911 266 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 VSIG10L2P0DP72 767 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 PGAM2P15259 253 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 ZNF45Q02386 682 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 SRSF4Q08170 494 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 BAK1Q16611 211 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 LPCAT3Q6P1A2 487 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 TOMM5Q8N4H5 51 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 OR4S2Q8NH73 311 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 TERB2Q8NHR7 220 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 WNT10AQ9GZT5 417 aa11.74□□□□□ -0.53
VIPAS39-210ENST00000557466 PLXNB1O43157 2135 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 RAMP3O60896 148 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 PI3P19957 117 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 KIR2DS2P43631 304 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 LGALS7P47929 136 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 AP3S2P59780 193 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 PLGLAQ15195 96 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 LINC00299Q6ZSB3 139 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 CMTM1Q8IZ96 169 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 SPAG16Q8N0X2 631 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 OR51S1Q8NGJ8 323 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 OR13C8Q8NGS7 320 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 MARCH1Q8TCQ1 289 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 WIPF2Q8TF74 440 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 HRASLSQ9HDD0 168 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 SLC2A9Q9NRM0 540 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 MCUBQ9NWR8 336 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 SLC2A8Q9NY64 477 aa11.73□□□□□ -0.53
VIPAS39-210ENST00000557466 IGHV7-81A0A0B4J1V7 117 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 FCN1O00602 326 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 KCNAB3O43448 404 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 CRYGBP07316 175 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 NDPQ00604 133 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 TRIQKQ629K1 86 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 LIN54Q6MZP7 749 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 FOXRED2Q8IWF2 684 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 NOL4LQ96MY1 436 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 PRRT1Q99946 306 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
VIPAS39-210ENST00000557466 STAB1Q9NY15 2570 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 AP4M1O00189 453 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 RBFOX2O43251 390 aaKnown RBP eCLIP11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 CA2P00918 260 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 SAA1P0DJI8 122 aaPredicted RBP11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 IL7P13232 177 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 S100GP29377 79 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 UBE2KP61086 200 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 RND3P61587 244 aa11.71□□□□□ -0.53
VIPAS39-210ENST00000557466 VMA21Q3ZAQ7 101 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms