RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 Q8N402 240 aa13.84□□□□□ -0.19
SHMT2-225ENST00000556798 MFSD4AQ8N468 514 aa13.84□□□□□ -0.19
SHMT2-225ENST00000556798 ZBTB34Q8NCN2 500 aa13.84□□□□□ -0.19
SHMT2-225ENST00000556798 OR4C16Q8NGL9 310 aa13.84□□□□□ -0.19
SHMT2-225ENST00000556798 HARBI1Q96MB7 349 aa13.84□□□□□ -0.19
SHMT2-225ENST00000556798 THAP7Q9BT49 309 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-225ENST00000556798 ZNF107Q9UII5 783 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-225ENST00000556798 LINC00527Q9UJ94 153 aa13.84□□□□□ -0.19
SHMT2-225ENST00000556798 TET2Q6N021 2002 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-225ENST00000556798 ANKRD20A5PA0PJZ0 165 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 RRHO14718 337 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 SHOXO15266 292 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 SLC25A17O43808 307 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 AKAIN1P0CW23 69 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 RRASP10301 218 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 PPP5CP53041 499 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 PLGLAQ15195 96 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 PSG5Q15238 335 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 SCGB2B2Q4G0G5 96 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 PHLDA2Q53GA4 152 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 TMEM177Q53S58 311 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 ZNF66Q6ZN08 573 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 SLC35E3Q7Z769 313 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 LHFPL1Q86WI0 220 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 ARRDC1Q8N5I2 433 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 C11orf44Q8N8P7 122 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 OR51H1Q8NH63 302 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 TRIM63Q969Q1 353 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 NOL4LQ96MY1 436 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-225ENST00000556798 TSNAXQ99598 290 aaKnown RBP13.83□□□□□ -0.2
SHMT2-225ENST00000556798 RNF5Q99942 180 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 SRRQ9GZT4 340 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 TPSG1Q9NRR2 321 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 METTL1Q9UBP6 276 aaKnown RBP13.83□□□□□ -0.2
SHMT2-225ENST00000556798 PRELID3BQ9Y3B1 194 aa13.83□□□□□ -0.2
SHMT2-225ENST00000556798 IGLV2-23P01705 113 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 IGHG2P01859 326 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 RLN1P04808 185 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 ZNF735P0CB33 412 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 PTBP1P26599 531 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHMT2-225ENST00000556798 BRWD1-AS2P59051 145 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 MEF2DQ14814 521 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 CLCC1Q96S66 551 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 WNT10AQ9GZT5 417 aa13.82□□□□□ -0.2
SHMT2-225ENST00000556798 SRRM4A7MD48 611 aaKnown RBP13.81□□□□□ -0.2
SHMT2-225ENST00000556798 GPR31O00270 319 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 SPDEFO95238 335 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 CATR1Q13166 79 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 LIN54Q6MZP7 749 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 C10orf99Q6UWK7 81 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 BORCS5Q969J3 196 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 RSRP1Q9BUV0 290 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 BATF3Q9NR55 127 aa13.81□□□□□ -0.2
SHMT2-225ENST00000556798 TNCP24821 2201 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 IGHV7-81A0A0B4J1V7 117 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 DISC1C4P0D8 188 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 FCN1O00602 326 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 RAMP3O60896 148 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 PGLYRP1O75594 196 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-225ENST00000556798 PGAM2P15259 253 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 PI3P19957 117 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 SHISA2Q6UWI4 295 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 IDO2Q6ZQW0 420 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 FOXRED2Q8IWF2 684 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 CMTM1Q8IZ96 169 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 SLC38A6Q8IZM9 456 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 OR4S2Q8NH73 311 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 MRGPRFQ96AM1 343 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 CITED1Q99966 193 aa13.8□□□□□ -0.2
SHMT2-225ENST00000556798 KCNAB3O43448 404 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 CA2P00918 260 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 LGALS7P47929 136 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 UCP3P55916 312 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 NDPQ00604 133 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 KLF9Q13886 244 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-225ENST00000556798 LPCAT3Q6P1A2 487 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 CENPVQ7Z7K6 275 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-225ENST00000556798 VKORC1L1Q8N0U8 176 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 TOMM5Q8N4H5 51 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 TERB2Q8NHR7 220 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 OSR1Q8TAX0 266 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-225ENST00000556798 WIPF2Q8TF74 440 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-225ENST00000556798 SDHCQ99643 169 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-225ENST00000556798 PARP11Q9NR21 331 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 MCUBQ9NWR8 336 aa13.79□□□□□ -0.2
SHMT2-225ENST00000556798 AP4M1O00189 453 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 ATP6V0E1O15342 81 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 CRYGBP07316 175 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 SAA1P0DJI8 122 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-225ENST00000556798 CD28P10747 220 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 KIR2DS2P43631 304 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 PJVKQ0ZLH3 352 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 BAK1Q16611 211 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 VMA21Q3ZAQ7 101 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 ZNF329Q86UD4 541 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 STPG2Q8N412 459 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 OR5AU1Q8NGC0 362 aa13.78□□□□□ -0.2
SHMT2-225ENST00000556798 OR51S1Q8NGJ8 323 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms