RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 COA4Q9NYJ1 87 aa14.37□□□□□ -0.11
CDKN3-209ENST00000556102 PEF1Q9UBV8 284 aaKnown RBP14.37□□□□□ -0.11
CDKN3-209ENST00000556102 STARD9Q9P2P6 4700 aa14.37□□□□□ -0.11
CDKN3-209ENST00000556102 SRRM4A7MD48 611 aaKnown RBP14.36□□□□□ -0.11
CDKN3-209ENST00000556102 GADD45AP24522 165 aa14.36□□□□□ -0.11
CDKN3-209ENST00000556102 DEFA5Q01523 94 aa14.36□□□□□ -0.11
CDKN3-209ENST00000556102 PRSS48Q7RTY5 328 aa14.36□□□□□ -0.11
CDKN3-209ENST00000556102 OR10R2Q8NGX6 335 aa14.36□□□□□ -0.11
CDKN3-209ENST00000556102 ISOC1Q96CN7 298 aa14.36□□□□□ -0.11
CDKN3-209ENST00000556102 USMG5Q96IX5 58 aa14.36□□□□□ -0.11
CDKN3-209ENST00000556102 NKX1-2Q9UD57 310 aaPredicted RBP14.36□□□□□ -0.11
CDKN3-209ENST00000556102 ERICH4A6NGS2 130 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 MFNGO00587 321 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 DYRK1AQ13627 763 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 TATDN3Q17R31 274 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 MRGPRG-AS1Q2M3A8 158 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 TEX45Q8NA69 505 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 MAFIPQ8WZ33 124 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 ADTRPQ96IZ2 230 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 PHB2Q99623 299 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 EDA2RQ9HAV5 297 aa14.35□□□□□ -0.11
CDKN3-209ENST00000556102 RBM7Q9Y580 266 aaKnown RBP14.35□□□□□ -0.11
CDKN3-209ENST00000556102 PDCD5O14737 125 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 TRBV12-3P01733 135 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 HIST1H1DP16402 221 aaKnown RBP14.34□□□□□ -0.11
CDKN3-209ENST00000556102 GNB3P16520 340 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 CRHBPP24387 322 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 MAP2K4P45985 399 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 UBE2KP61086 200 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 RPEL1Q2QD12 228 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 VMA21Q3ZAQ7 101 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 DDB2Q92466 427 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 LYSTQ99698 3801 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 SPATA25Q9BR10 227 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 GINS4Q9BRT9 223 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 SIGLEC8Q9NYZ4 499 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 ZNF230Q9UIE0 474 aaPredicted RBP14.34□□□□□ -0.11
CDKN3-209ENST00000556102 ADAM30Q9UKF2 790 aa14.34□□□□□ -0.11
CDKN3-209ENST00000556102 CSMD3Q7Z407 3707 aa14.33□□□□□ -0.11
CDKN3-209ENST00000556102 A0A075B6Q4 140 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 TRAV1-2A0A0B4J238 106 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 LCE6AA0A183 80 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 MSGN1A6NI15 193 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 RAB27BO00194 218 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 CRYZL1O95825 349 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 CSN3P07498 182 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 OR9G9P0C7N8 305 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 APELAP0DMC3 54 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 RAB6AP20340 208 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 DUTP33316 252 aaKnown RBP14.33□□□□□ -0.12
CDKN3-209ENST00000556102 OR10A3P58181 314 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 TNXAQ16473 311 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 PRSS8Q16651 343 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 ZFAND6Q6FIF0 208 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 LCN12Q6JVE5 192 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 Q6ZS49 121 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 GTSCR1Q86UQ5 136 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 Q8N402 240 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 ADAD2Q8NCV1 583 aaKnown RBP14.33□□□□□ -0.12
CDKN3-209ENST00000556102 NRG4Q8WWG1 115 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 THAP7Q9BT49 309 aaPredicted RBP14.33□□□□□ -0.12
CDKN3-209ENST00000556102 CENPOQ9BU64 300 aa14.33□□□□□ -0.12
CDKN3-209ENST00000556102 IFITM5A6NNB3 132 aa14.32□□□□□ -0.12
CDKN3-209ENST00000556102 ANKRD65E5RJM6 399 aa14.32□□□□□ -0.12
CDKN3-209ENST00000556102 RBMXL2O75526 392 aaKnown RBP14.32□□□□□ -0.12
CDKN3-209ENST00000556102 OR2A4O95047 310 aa14.32□□□□□ -0.12
CDKN3-209ENST00000556102 ARFRP1Q13795 201 aa14.32□□□□□ -0.12
CDKN3-209ENST00000556102 TBCEQ15813 527 aaPredicted RBP14.32□□□□□ -0.12
CDKN3-209ENST00000556102 HAGHQ16775 308 aa14.32□□□□□ -0.12
CDKN3-209ENST00000556102 H1FOOQ8IZA3 346 aaPredicted RBP14.32□□□□□ -0.12
CDKN3-209ENST00000556102 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
CDKN3-209ENST00000556102 SRSF12Q8WXF0 261 aaKnown RBP14.32□□□□□ -0.12
CDKN3-209ENST00000556102 SNAPC3Q92966 411 aa14.32□□□□□ -0.12
CDKN3-209ENST00000556102 A0A0B4J203 849 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 SHISA3A0PJX4 238 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 METTL21EPA6NDL7 271 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 LINC00473A8K010 186 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 MPPED1O15442 326 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 TALDO1P37837 337 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 SSX1Q16384 188 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 IDO2Q6ZQW0 420 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 ZNF367Q7RTV3 350 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 TUBA4BQ9H853 241 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 PEMTQ9UBM1 199 aa14.31□□□□□ -0.12
CDKN3-209ENST00000556102 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
CDKN3-209ENST00000556102 MYL9P24844 172 aa14.3□□□□□ -0.12
CDKN3-209ENST00000556102 RHOGP84095 191 aa14.3□□□□□ -0.12
CDKN3-209ENST00000556102 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
CDKN3-209ENST00000556102 OR2K2Q8NGT1 345 aa14.3□□□□□ -0.12
CDKN3-209ENST00000556102 ACOT12Q8WYK0 555 aa14.3□□□□□ -0.12
CDKN3-209ENST00000556102 GAR1Q9NY12 217 aaKnown RBP14.3□□□□□ -0.12
CDKN3-209ENST00000556102 DNAH1Q9P2D7 4330 aa14.3□□□□□ -0.12
CDKN3-209ENST00000556102 IGKV1D-8A0A087WSZ0 117 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 IZUMO1RA6ND01 250 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 AIREO43918 545 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 CREBL2O60519 120 aaPredicted RBP14.29□□□□□ -0.12
CDKN3-209ENST00000556102 RAB3BP20337 219 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 DTYMKP23919 212 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 MECP2P51608 486 aaKnown RBP14.29□□□□□ -0.12
CDKN3-209ENST00000556102 EXOSC2Q13868 293 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms