RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NPCDR1Q9BY65 106 aa8.99□□□□□ -0.97
MTHFD1-210ENST00000555252 HES7Q9BYE0 225 aa8.99□□□□□ -0.97
MTHFD1-210ENST00000555252 PLA2G3Q9NZ20 509 aa8.99□□□□□ -0.97
MTHFD1-210ENST00000555252 FRYLO94915 3013 aa8.99□□□□□ -0.97
MTHFD1-210ENST00000555252 PMS2P5A8MQ11 134 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 CLDN1O95832 211 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 ADMP35318 185 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 COX19Q49B96 90 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 CYB5R2Q6BCY4 276 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 Q6ZWC4 215 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 PRR18Q8N4B5 295 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 OR5AU1Q8NGC0 362 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 OR1K1Q8NGR3 316 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 TMEM204Q9BSN7 226 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 ZDHHC11Q9H8X9 412 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 WIPI2Q9Y4P8 454 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 LY96Q9Y6Y9 160 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 MPDU1O75352 247 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 CCL2P13500 99 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 NPPCP23582 126 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 FOXG1P55316 489 aaPredicted RBP8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 CLEC12BQ2HXU8 276 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 CST9LP1Q5W188 147 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 FBXW9Q5XUX1 488 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 OR8G2PQ6IF36 304 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 SGMS2Q8NHU3 365 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 MSL2Q9HCI7 577 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 ASCL3Q9NQ33 180 aa8.98□□□□□ -0.97
MTHFD1-210ENST00000555252 A0A1W2PNU3 283 aaPredicted RBP8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 ZNF503-AS2A6NEH8 195 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 NGFP01138 241 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 P0C879 139 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 CRISP2P16562 243 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 KITLGP21583 273 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 WNT5AP41221 380 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 GNB1P62873 340 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 PRSS8Q16651 343 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 IZUMO4Q1ZYL8 232 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 FAM58AQ8N1B3 248 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 FGFRL1Q8N441 504 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 BCL2L2Q92843 193 aaPredicted RBP8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 RNF2Q99496 336 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 ZNF552Q9H707 407 aaPredicted RBP8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 SLC45A2Q9UMX9 530 aa8.97□□□□□ -0.97
MTHFD1-210ENST00000555252 SAA2-SAA4A0A096LPE2 208 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 TRAV39A0A0B4J263 110 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 J3QT63 122 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 SYNGR1O43759 233 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 NUPR1O60356 82 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 REG1AP05451 166 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 MRPL49Q13405 166 aaKnown RBP8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 TBC1D28Q2M2D7 210 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 C20orf204Q6ZNR8 217 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 Q8IYB0 196 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 BATF2Q8N1L9 274 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 OR10G8Q8NGN5 311 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 GATAD1Q8WUU5 269 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 WFIKKN1Q96NZ8 548 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 IL36BQ9NZH7 164 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 CRIM1Q9NZV1 1036 aa8.96□□□□□ -0.97
MTHFD1-210ENST00000555252 TRAV24A0A0B4J272 114 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 LRRC30A6NM36 301 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 C1QTNF9BB2RNN3 333 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 M0R296 226 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 MT-ND6P03923 174 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 TIMP3P35625 211 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 ORAOV1Q8WV07 137 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 RDH5Q92781 318 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 SLC35E1Q96K37 410 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 RTL8AQ9BWD3 113 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 DLL3Q9NYJ7 618 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 TP53TG3Q9ULZ0 132 aa8.96□□□□□ -0.98
MTHFD1-210ENST00000555252 SDK2Q58EX2 2172 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 ARHGAP21Q5T5U3 1957 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 TRGV5A0A0B4J1U4 118 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 A6NNC1 897 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 RAB29O14966 203 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 RAB7AP51149 207 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 CATR1Q13166 79 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 OR5I1Q13606 314 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 TRIP6Q15654 476 aaKnown RBP8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 WDR31Q8NA23 367 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 TMEM178AQ8NBL3 297 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 HSPB9Q9BQS6 159 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 GAL3ST2Q9H3Q3 398 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 ZNF586Q9NXT0 402 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 PPP1R3CQ9UQK1 317 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 WDR83OSQ9Y284 106 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 POLDIP2Q9Y2S7 368 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 RBM7Q9Y580 266 aaKnown RBP8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 ESPL1Q14674 2120 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 GTF3C1Q12789 2109 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 C9JCJ5 164 aa8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 CDX4O14627 284 aaPredicted RBP8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 HMGB3O15347 200 aaKnown RBP8.95□□□□□ -0.98
MTHFD1-210ENST00000555252 SIAH2O43255 324 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms