RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CCL17Q92583 94 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 C14orf144Q96I85 54 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 SSX3Q99909 188 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 FBXL17Q9UF56 701 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 TET2Q6N021 2002 aaPredicted RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 SAA2-SAA4A0A096LPE2 208 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 IL6RP08887 468 aaPredicted RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 SAA2P0DJI9 122 aaPredicted RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 NDUFB7P17568 137 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 NKX2-1P43699 371 aaPredicted RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 TMEM33P57088 247 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 RPL39P5Q59GN2 51 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 NCR3LG1Q68D85 454 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 SVBPQ8N300 66 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 C8orf46Q8TAG6 207 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 ABHD14AQ9BUJ0 271 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 METTL1Q9UBP6 276 aaKnown RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 DVL1O14640 695 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 RBFOX2O43251 390 aaKnown RBP eCLIP7.3□□□□□ -1.24
TDP1-210ENST00000554976 TMEM155Q4W5P6 130 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 PRAMEF5Q5TYX0 476 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 RPL7L1Q6DKI1 246 aaKnown RBP7.3□□□□□ -1.24
TDP1-210ENST00000554976 ZNF833PQ6ZTB9 187 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 LEAP2Q969E1 77 aa7.3□□□□□ -1.24
TDP1-210ENST00000554976 hADV38S2A0JD32 116 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 F5H0A9 414 aaPredicted RBP7.29□□□□□ -1.24
TDP1-210ENST00000554976 TXNL1O43396 289 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 CLDN1O95832 211 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 SERPINE2P07093 398 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 EWSR1Q01844 656 aaKnown RBP eCLIP7.29□□□□□ -1.24
TDP1-210ENST00000554976 COTL1Q14019 142 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 HEPN1Q6WQI6 88 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 FOXRED2Q8IWF2 684 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 SPAG16Q8N0X2 631 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 UBAC2Q8NBM4 344 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 GINS3Q9BRX5 216 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 C2orf88Q9BSF0 95 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 ZNF471Q9BX82 626 aaPredicted RBP7.29□□□□□ -1.24
TDP1-210ENST00000554976 RAB9BQ9NP90 201 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 LPAR3Q9UBY5 353 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 HSPB7Q9UBY9 170 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 CACNG5Q9UF02 275 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 NCOR2Q9Y618 2525 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 PKD1L2Q7Z442 2459 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 FAM90A9PA6NNJ1 464 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 FAM90A26D6RGX4 464 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 LYNX1G3V0Z9 82 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 RAB29O14966 203 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 LYNX1P0DP58 116 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 TPT1P13693 172 aaKnown RBP7.29□□□□□ -1.24
TDP1-210ENST00000554976 GPR12P47775 334 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 RAB7AP51149 207 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 ZNF137PP52743 207 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 ERVFRD-1P60508 538 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 NHLH2Q02577 135 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 HABP2Q14520 560 aaPredicted RBP7.29□□□□□ -1.24
TDP1-210ENST00000554976 LTC4SQ16873 150 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 UQCC3Q6UW78 93 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 CLEC9AQ6UXN8 241 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 REC114Q7Z4M0 266 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 LINC00311Q8N616 119 aa7.29□□□□□ -1.24
TDP1-210ENST00000554976 BBC3Q96PG8 261 aaPredicted RBP7.29□□□□□ -1.24
TDP1-210ENST00000554976 CHD8Q9HCK8 2581 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 A6NNC1 897 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 SSSCA1O60232 199 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 CCL3L1P16619 93 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 CATR1Q13166 79 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 TMEM88Q6PEY1 159 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 HAPLN4Q86UW8 402 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 PUSL1Q8N0Z8 303 aaKnown RBP7.28□□□□□ -1.24
TDP1-210ENST00000554976 OR2C3Q8N628 320 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 LY6G5BQ8NDX9 201 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 GNG12Q9UBI6 72 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 ATRXP46100 2492 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 FAM24AA6NFZ4 105 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 G6PCP35575 357 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 TAS2R30P59541 319 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 ZNF816Q0VGE8 651 aaPredicted RBP7.28□□□□□ -1.24
TDP1-210ENST00000554976 SP5Q6BEB4 398 aaPredicted RBP7.28□□□□□ -1.24
TDP1-210ENST00000554976 TMEM252Q8N6L7 170 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 ZNF383Q8NA42 475 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 BPIFCQ8NFQ6 507 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 RXFP4Q8TDU9 374 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 TCTEX1D2Q8WW35 142 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 ST6GALNAC6Q969X2 333 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 ZNF714Q96N38 554 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 ZNRD1Q9P1U0 126 aa7.28□□□□□ -1.24
TDP1-210ENST00000554976 PMS2P5A8MQ11 134 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 TCAPO15273 167 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 CHST1O43916 411 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 C1QL1O75973 258 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 IFNA10P01566 189 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 DAOP14920 347 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 PAX6P26367 422 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 RPL31P62899 125 aaKnown RBP7.27□□□□□ -1.24
TDP1-210ENST00000554976 CBLN2Q8IUK8 224 aa7.27□□□□□ -1.24
TDP1-210ENST00000554976 ZFP82Q8N141 532 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms