RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CX3CL1P78423 397 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 DYRK1AQ13627 763 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 TMEM177Q53S58 311 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 TET2Q6N021 2002 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-214ENST00000554928 ZNF818PQ6ZRF7 136 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 FOXRED2Q8IWF2 684 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 OR5H2Q8NGV7 314 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 GIMAP1Q8WWP7 306 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 HARBI1Q96MB7 349 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 ZNF2Q9BSG1 426 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-214ENST00000554928 FAM103A1Q9BTL3 118 aaKnown RBP9.69□□□□□ -0.86
SYNE2-214ENST00000554928 C6orf62Q9GZU0 229 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-214ENST00000554928 SLC5A7Q9GZV3 580 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 OR51J1Q9H342 316 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 SCPEP1Q9HB40 452 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 PARP11Q9NR21 331 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 KIAA1456Q9P272 454 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 TCRBV4S1A1TA0A5B7 111 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 IGF1P05019 195 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 RCVRNP35243 200 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 PLGLAQ15195 96 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 C2orf68Q2NKX9 166 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 C19orf54Q5BKX5 351 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 FOXB2Q5VYV0 432 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 DHRS11Q6UWP2 260 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 IDO2Q6ZQW0 420 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 KCTD9Q7L273 389 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 NDUFA11Q86Y39 141 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 MFSD4AQ8N468 514 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 OR4D10Q8NGI6 311 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 CHPT1Q8WUD6 406 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 MOB3AQ96BX8 217 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 TSNAXQ99598 290 aaKnown RBP9.68□□□□□ -0.86
SYNE2-214ENST00000554928 RNF5Q99942 180 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 TINAGL1Q9GZM7 467 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-214ENST00000554928 RSL24D1Q9UHA3 163 aaKnown RBP9.68□□□□□ -0.86
SYNE2-214ENST00000554928 A3GALT2U3KPV4 340 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 PLXNB1O43157 2135 aa9.68□□□□□ -0.86
SYNE2-214ENST00000554928 J3QL48 77 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 SULT1C2O00338 296 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 SHOXO15266 292 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 KCNAB3O43448 404 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 SOX15O60248 233 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 RAMP3O60896 148 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 SPDEFO95238 335 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 RPLP1P05386 114 aaKnown RBP9.67□□□□□ -0.86
SYNE2-214ENST00000554928 PPIFP30405 207 aaKnown RBP9.67□□□□□ -0.86
SYNE2-214ENST00000554928 GNRHRP30968 328 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 TNFSF8P32971 234 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 TAS2R46P59540 309 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 TAGLNQ01995 201 aaKnown RBP9.67□□□□□ -0.86
SYNE2-214ENST00000554928 VKORC1L1Q8N0U8 176 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 OR4X2Q8NGF9 303 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 MCFD2Q8NI22 146 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 CASTOR1Q8WTX7 329 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 TCTEX1D2Q8WW35 142 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 DIRAS2Q96HU8 199 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 ADTRPQ96IZ2 230 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 KLK15Q9H2R5 256 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 MTFP1Q9UDX5 166 aa9.67□□□□□ -0.86
SYNE2-214ENST00000554928 CD3DP04234 171 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 SAA1P0DJI8 122 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-214ENST00000554928 HERV-K104P61576 105 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 RPL23AP62750 156 aaKnown RBP9.66□□□□□ -0.86
SYNE2-214ENST00000554928 GNB1P62873 340 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 RTL8BQ17RB0 113 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 FAAP20Q6NZ36 180 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 ETV3LQ6ZN32 361 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 R3HDM4Q96D70 268 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 MMP27Q9H306 513 aa9.66□□□□□ -0.86
SYNE2-214ENST00000554928 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-214ENST00000554928 TRAV41A0A0B4J266 112 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 DPPA5A6NC42 116 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 SLC22A5O76082 557 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 IGHG4P01861 327 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 RRASP10301 218 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 VDAC1P21796 283 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 LGALS7P47929 136 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 CRIP2P52943 208 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-214ENST00000554928 UBE2KP61086 200 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 SLC35B1P78383 322 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 IL18Q14116 193 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 KIAA0141Q14154 515 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-214ENST00000554928 VAX1Q5SQQ9 334 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 C10orf55Q5SWW7 151 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 ASPHD1Q5U4P2 390 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 AADACL3Q5VUY0 350 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 ZNF66Q6ZN08 573 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 PPP1R27Q86WC6 154 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 MINDY2Q8NBR6 621 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 OR51H1Q8NH63 302 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 GRPEL2Q8TAA5 225 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 HSD17B10Q99714 261 aaKnown RBP9.65□□□□□ -0.86
SYNE2-214ENST00000554928 ZNF580Q9UK33 172 aa9.65□□□□□ -0.86
SYNE2-214ENST00000554928 NUBP2Q9Y5Y2 271 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms