RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 AMY1AP04745 511 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 GNRHRP30968 328 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 KIR2DS2P43631 304 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 F2RL1P55085 397 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 UCP3P55916 312 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 LINC00299Q6ZSB3 139 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 MFSD4AQ8N468 514 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 NPBQ8NG41 125 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 OR4D10Q8NGI6 311 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 OR4C16Q8NGL9 310 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 OR4S2Q8NH73 311 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 DDB2Q92466 427 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 RBMXL1Q96E39 390 aaKnown RBP11.01□□□□□ -0.65
TUBB3-202ENST00000553656 PRRT1Q99946 306 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 PLSCR3Q9NRY6 295 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 SIGLEC9Q9Y336 463 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 RRHO14718 337 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 KCNAB3O43448 404 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 CNTFRP26992 372 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 ECI1P42126 302 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 LGALS7P47929 136 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 PPP5CP53041 499 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
TUBB3-202ENST00000553656 C5orf64Q2M2E5 130 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 PHLDA2Q53GA4 152 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 ZNF57Q68EA5 555 aaPredicted RBP11□□□□□ -0.65
TUBB3-202ENST00000553656 FAAP20Q6NZ36 180 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 SLC35E3Q7Z769 313 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 FOXRED2Q8IWF2 684 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 FAM71E2Q8N5Q1 922 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 OR51H1Q8NH63 302 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 TERB2Q8NHR7 220 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 SPATA3Q8NHX4 192 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 OSR1Q8TAX0 266 aaPredicted RBP11□□□□□ -0.65
TUBB3-202ENST00000553656 TRIM63Q969Q1 353 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 RITA1Q96K30 269 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 GPHA2Q96T91 129 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 METTL1Q9UBP6 276 aaKnown RBP11□□□□□ -0.65
TUBB3-202ENST00000553656 SCP2D1Q9UJQ7 156 aa11□□□□□ -0.65
TUBB3-202ENST00000553656 NDUFA3O95167 84 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 RLN1P04808 185 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 VSIG10L2P0DP72 767 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 EIF4EBP1Q13541 118 aaPredicted RBP10.99□□□□□ -0.65
TUBB3-202ENST00000553656 PSG5Q15238 335 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 VMA21Q3ZAQ7 101 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 TMEM177Q53S58 311 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 LIN54Q6MZP7 749 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 Q6ZS46 218 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 LHFPL1Q86WI0 220 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 SPAG16Q8N0X2 631 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 ZFAND1Q8TCF1 268 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 CD300LFQ8TDQ1 290 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 DEDD2Q8WXF8 326 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 S100ZQ8WXG8 99 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 RSRP1Q9BUV0 290 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
TUBB3-202ENST00000553656 FBN1P35555 2871 aaKnown RBP10.99□□□□□ -0.65
TUBB3-202ENST00000553656 SLC25A17O43808 307 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
TUBB3-202ENST00000553656 ZNF735P0CB33 412 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 PROK1P58294 105 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 KLF9Q13886 244 aaPredicted RBP10.98□□□□□ -0.65
TUBB3-202ENST00000553656 TMEM95Q3KNT9 176 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 IDO2Q6ZQW0 420 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 CCDC71LQ8N9Z2 235 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 OR51S1Q8NGJ8 323 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 WFDC12Q8WWY7 111 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 ZNF486Q96H40 463 aaPredicted RBP10.98□□□□□ -0.65
TUBB3-202ENST00000553656 AIFM2Q9BRQ8 373 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 SERTAD4Q9NUC0 356 aa10.98□□□□□ -0.65
TUBB3-202ENST00000553656 C14orf166Q9Y224 244 aaKnown RBP10.98□□□□□ -0.65
TUBB3-202ENST00000553656 AP4M1O00189 453 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 RBFOX2O43251 390 aaKnown RBP eCLIP10.97□□□□□ -0.65
TUBB3-202ENST00000553656 CREBL2O60519 120 aaPredicted RBP10.97□□□□□ -0.65
TUBB3-202ENST00000553656 HRASP01112 189 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 IGHG2P01859 326 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 HLA-DRB1P01911 266 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 SURF2Q15527 256 aaPredicted RBP10.97□□□□□ -0.65
TUBB3-202ENST00000553656 CENPVQ7Z7K6 275 aaPredicted RBP10.97□□□□□ -0.65
TUBB3-202ENST00000553656 TCTEX1D1Q8N7M0 179 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 OR13C8Q8NGS7 320 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 MARCH1Q8TCQ1 289 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 SCGB3A2Q96PL1 93 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 ZNF747Q9BV97 191 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 HRASLSQ9HDD0 168 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 AKIP1Q9NQ31 210 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 SLC2A9Q9NRM0 540 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 SLC2A8Q9NY64 477 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 COPZ2Q9P299 210 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 COL6A5A8TX70 2615 aa10.97□□□□□ -0.65
TUBB3-202ENST00000553656 CENPXA8MT69 81 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 PI3P19957 117 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 F2RP25116 425 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 PIGPP57054 158 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 UBE2KP61086 200 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 BAK1Q16611 211 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 SHISA2Q6UWI4 295 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 TBC1D26Q86UD7 250 aa10.96□□□□□ -0.65
TUBB3-202ENST00000553656 PPP1R27Q86WC6 154 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms