RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 RAB22AQ9UL26 194 aa8.75□□□□□ -1.01
NEK3-204ENST00000552973 TRBV6-7A0A0A0MS04 114 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 A0A0B4J203 849 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 IZUMO1RA6ND01 250 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 H0Y980 276 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 CSN3P07498 182 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 DYRK1AQ13627 763 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 TRAM1Q15629 374 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 TNXAQ16473 311 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 RPEL1Q2QD12 228 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 TMEM177Q53S58 311 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
NEK3-204ENST00000552973 ZNF343Q6P1L6 599 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 ADAMTSL5Q6ZMM2 481 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 OR10R2Q8NGX6 335 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 TMEM68Q96MH6 324 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 GINS4Q9BRT9 223 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 CABLES2Q9BTV7 478 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 TUBA4BQ9H853 241 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 EDA2RQ9HAV5 297 aa8.74□□□□□ -1.01
NEK3-204ENST00000552973 IGKV1D-8A0A087WSZ0 117 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 LCE6AA0A183 80 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 SHISA3A0PJX4 238 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 A8MZ25 164 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 MPPED1O15442 326 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 CRYZL1O95825 349 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 AADACP22760 399 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 PSMA1P25786 263 aaKnown RBP8.73□□□□□ -1.01
NEK3-204ENST00000552973 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
NEK3-204ENST00000552973 CBX3Q13185 183 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 ARFRP1Q13795 201 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 HAGHQ16775 308 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 TATDN3Q17R31 274 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 RTL8BQ17RB0 113 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 VMA21Q3ZAQ7 101 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 ACOT12Q8WYK0 555 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 ISOC1Q96CN7 298 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 ELF5Q9UKW6 265 aaPredicted RBP8.73□□□□□ -1.01
NEK3-204ENST00000552973 RYR2Q92736 4967 aa8.73□□□□□ -1.01
NEK3-204ENST00000552973 SMIM30A4D0T7 59 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 LINC00473A8K010 186 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 RAB27BO00194 218 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 MFNGO00587 321 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 OR9G9P0C7N8 305 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 RRASP10301 218 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 CRHBPP24387 322 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 GADD45AP24522 165 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 DUTP33316 252 aaKnown RBP8.72□□□□□ -1.01
NEK3-204ENST00000552973 TALDO1P37837 337 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 PSMD7P51665 324 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 UBE2KP61086 200 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 SSX1Q16384 188 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 PRSS8Q16651 343 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 C10orf55Q5SWW7 151 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 PRSS48Q7RTY5 328 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 TEX45Q8NA69 505 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 ADAD2Q8NCV1 583 aaKnown RBP8.72□□□□□ -1.01
NEK3-204ENST00000552973 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
NEK3-204ENST00000552973 DDB2Q92466 427 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 USMG5Q96IX5 58 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 SPATA25Q9BR10 227 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 DCUN1D5Q9BTE7 237 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 RETNQ9HD89 108 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 ACOT13Q9NPJ3 140 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 SACSQ9NZJ4 4579 aa8.72□□□□□ -1.01
NEK3-204ENST00000552973 PDCD5O14737 125 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 FCGR3BO75015 233 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 BRI3O95415 125 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 HIST1H1DP16402 221 aaKnown RBP8.71□□□□□ -1.02
NEK3-204ENST00000552973 RHOGP84095 191 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 ZNF45Q02386 682 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 ATP5G2Q06055 141 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 OR2B11Q5JQS5 317 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 H1FOOQ8IZA3 346 aaPredicted RBP8.71□□□□□ -1.02
NEK3-204ENST00000552973 Q8N402 240 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 SNAPC3Q92966 411 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 THAP7Q9BT49 309 aaPredicted RBP8.71□□□□□ -1.02
NEK3-204ENST00000552973 ST6GALNAC5Q9BVH7 336 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 ATG5Q9H1Y0 275 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 ZNF430Q9H8G1 570 aaPredicted RBP8.71□□□□□ -1.02
NEK3-204ENST00000552973 PLEKHA3Q9HB20 300 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 AKIP1Q9NQ31 210 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 SELENOKQ9Y6D0 94 aa8.71□□□□□ -1.02
NEK3-204ENST00000552973 SORL1Q92673 2214 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 HMX3A6NHT5 357 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 IFITM5A6NNB3 132 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 BMPR1BO00238 502 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 TUSC2O75896 110 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 OR2J3O76001 311 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 ACTL6BO94805 426 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 IFNA6P05013 189 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 SAA1P0DJI8 122 aaPredicted RBP8.7□□□□□ -1.02
NEK3-204ENST00000552973 EDN2P20800 178 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 NFYAP23511 347 aaPredicted RBP8.7□□□□□ -1.02
NEK3-204ENST00000552973 MYL9P24844 172 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 RANBP1P43487 201 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 CD81P60033 236 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 EXOSC2Q13868 293 aaKnown RBP8.7□□□□□ -1.02
NEK3-204ENST00000552973 LCN12Q6JVE5 192 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms