RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 MED28Q9H204 178 aa11.41□□□□□ -0.58
CACNB3-216ENST00000550391 ABCA1O95477 2261 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 RBFOX2O43251 390 aaKnown RBP eCLIP11.4□□□□□ -0.58
CACNB3-216ENST00000550391 CDS2O95674 445 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 APOA2P02652 100 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 RRASP10301 218 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 SAA4P35542 130 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 BRWD1-AS2P59051 145 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 RRAS2P62070 204 aaPredicted RBP11.4□□□□□ -0.58
CACNB3-216ENST00000550391 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 OR2B11Q5JQS5 317 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.58
CACNB3-216ENST00000550391 LIN54Q6MZP7 749 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 OR8H3Q8N146 312 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 MALSU1Q96EH3 234 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 AJUBAQ96IF1 538 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 TMEM56Q96MV1 263 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 PRR13Q9NZ81 148 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 TMEM56-RWDD3S4R434 201 aa11.4□□□□□ -0.58
CACNB3-216ENST00000550391 IGHV1-3A0A0C4DH29 117 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 HMX3A6NHT5 357 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 H0YJW9 148 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 CD5LO43866 347 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 FCGR3BO75015 233 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 RPA2P15927 270 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 MC5RP33032 325 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 LPAR6P43657 344 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 BCAP31P51572 246 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 BPIFB3P59826 476 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 RTL8BQ17RB0 113 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 MOB3BQ86TA1 216 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 SELENOHQ8IZQ5 122 aaKnown RBP11.39□□□□□ -0.59
CACNB3-216ENST00000550391 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 TEX29Q8N6K0 151 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 OR4S2Q8NH73 311 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 IL22RA2Q969J5 263 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 SLC35D1Q9NTN3 355 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 HILPDAQ9Y5L2 63 aa11.39□□□□□ -0.59
CACNB3-216ENST00000550391 IGHV3OR16-10A0A075B7F0 116 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 A0A1W2PPI3 338 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 DBX1A6NMT0 343 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 A8MV72 311 aaPredicted RBP11.38□□□□□ -0.59
CACNB3-216ENST00000550391 RAMP3O60896 148 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 HPRT1P00492 218 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 FSHBP01225 129 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 RAB13P51153 203 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 SSX2Q16385 188 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 TMEM268Q5VZI3 342 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
CACNB3-216ENST00000550391 PDPNQ86YL7 162 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 DYNAPQ8N1N2 210 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 NANPQ8TBE9 248 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 CHAC2Q8WUX2 184 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 C17orf50Q8WW18 174 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 RBPMSQ93062 196 aaKnown RBP11.38□□□□□ -0.59
CACNB3-216ENST00000550391 PLEKHA2Q9HB19 425 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 RAB18Q9NP72 206 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 WASHC3Q9Y3C0 194 aa11.38□□□□□ -0.59
CACNB3-216ENST00000550391 DUXBA0A1W2PPF3 345 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 H7C2Y5 167 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 ATG12O94817 140 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 IFNA21P01568 189 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 TRAPPC2P0DI81 140 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 TRAPPC2BP0DI82 140 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 SULT1A3P0DMM9 295 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 SULT1A4P0DMN0 295 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 HLA-GP17693 338 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 FCN2Q15485 313 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 BRD3OSQ6XYD6 125 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 COMMD9Q9P000 198 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 MGAT4CQ9UBM8 478 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 NUP50Q9UKX7 468 aa11.37□□□□□ -0.59
CACNB3-216ENST00000550391 SONP18583 2426 aaKnown RBP11.37□□□□□ -0.59
CACNB3-216ENST00000550391 TIMM23O14925 209 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 S1PR2O95136 353 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 CRYZL1O95825 349 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 IGKV1-39P01597 117 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 IGKV1D-39P04432 117 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 HOXB5P09067 269 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 CD1BP29016 333 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 HABP2Q14520 560 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-216ENST00000550391 LYZL2Q7Z4W2 148 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 CFHR4Q92496 578 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 FLYWCH2Q96CP2 140 aaKnown RBP11.36□□□□□ -0.59
CACNB3-216ENST00000550391 AIFM2Q9BRQ8 373 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 FAM96BQ9Y3D0 163 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 TMED3Q9Y3Q3 217 aa11.36□□□□□ -0.59
CACNB3-216ENST00000550391 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 GOSR2O14653 212 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 ADAP1O75689 374 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 HRASP01112 189 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms