RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 U3KQK5 164 aa5.18□□□□□ -1.58
SCAF11-211ENST00000547950 TRAV1-2A0A0B4J238 106 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 SHISA3A0PJX4 238 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 METTL21EPA6NDL7 271 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 RAB27BO00194 218 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 ARPC1BO15143 372 aaKnown RBP5.17□□□□□ -1.58
SCAF11-211ENST00000547950 SHOXO15266 292 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 FCGR3AP08637 254 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 LGALS1P09382 135 aaKnown RBP5.17□□□□□ -1.58
SCAF11-211ENST00000547950 SPNP16150 400 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 RAB3BP20337 219 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 LGALS7P47929 136 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 HSPA13P48723 471 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 TBCEQ15813 527 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF124Q15973 351 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 CDNFQ49AH0 187 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 C22orf42Q6IC83 251 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 PYHIN1Q6K0P9 492 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 OVCH2Q7RTZ1 564 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 PDPNQ86YL7 162 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 WFDC3Q8IUB2 231 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 BVESQ8NE79 360 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 RHOVQ96L33 236 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 OR4C12Q96R67 309 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 GINS4Q9BRT9 223 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 ST6GALNAC5Q9BVH7 336 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 OR2D2Q9H210 308 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 ELF5Q9UKW6 265 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-211ENST00000547950 BLOC1S6Q9UL45 172 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 SMAD5-AS1Q9Y6J3 95 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 NBEAL2Q6ZNJ1 2754 aa5.17□□□□□ -1.58
SCAF11-211ENST00000547950 IGKV1D-8A0A087WSZ0 117 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 TRBV6-7A0A0A0MS04 114 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 C13orf42A0A1B0GVH6 325 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 TRDV1A0A1B0GX56 115 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 ANKRD34BA5PLL1 514 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 MSGN1A6NI15 193 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 SRRM4A7MD48 611 aaKnown RBP5.16□□□□□ -1.58
SCAF11-211ENST00000547950 SPDEFO95238 335 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 IGLV2-23P01705 113 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 APELAP0DMC3 54 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 GP9P14770 177 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 HIST1H1DP16402 221 aaKnown RBP5.16□□□□□ -1.58
SCAF11-211ENST00000547950 PSMB9P28065 219 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 PITPNAQ00169 270 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 CBX3Q13185 183 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 RTL8BQ17RB0 113 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 ACSM6Q6P461 480 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 HAPLN4Q86UW8 402 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 NR2C2APQ86WQ0 139 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-211ENST00000547950 HARBI1Q96MB7 349 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 PHB2Q99623 299 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 DCUN1D5Q9BTE7 237 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 RSRP1Q9BUV0 290 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 ELOVL1Q9BW60 279 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 SLA2Q9H6Q3 261 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 RANGRFQ9HD47 186 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-211ENST00000547950 NDUFB11Q9NX14 153 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 RAB26Q9ULW5 256 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 U3KQE9 123 aa5.16□□□□□ -1.58
SCAF11-211ENST00000547950 TENM3Q9P273 2699 aa5.15□□□□□ -1.58
SCAF11-211ENST00000547950 A0A0G2JLM5 398 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 TRIM64CA6NLI5 447 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 MFNGO00587 321 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 MPPED1O15442 326 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 CRYZL1O95825 349 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 CRYGBP07316 175 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 RRASP10301 218 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 NFYAP23511 347 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-211ENST00000547950 SSBP2P81877 361 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-211ENST00000547950 DEFA5Q01523 94 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 TAGLNQ01995 201 aaKnown RBP5.15□□□□□ -1.59
SCAF11-211ENST00000547950 SRSF7Q16629 238 aaKnown RBP eCLIP5.15□□□□□ -1.59
SCAF11-211ENST00000547950 IDO2Q6ZQW0 420 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 ANKRD13BQ86YJ7 626 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 SBSPONQ8IVN8 264 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 SPARTQ8N0X7 666 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 POC5Q8NA72 575 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 OR6Q1Q8NGQ2 317 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 C5orf30Q96GV9 206 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 CITED4Q96RK1 184 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 CABLES2Q9BTV7 478 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 CENPOQ9BU64 300 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 TXNL4BQ9NX01 149 aaKnown RBP5.15□□□□□ -1.59
SCAF11-211ENST00000547950 COA4Q9NYJ1 87 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 DAPK2Q9UIK4 370 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.59
SCAF11-211ENST00000547950 DNAH3Q8TD57 4116 aa5.15□□□□□ -1.59
SCAF11-211ENST00000547950 COL7A1Q02388 2944 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 LINC00473A8K010 186 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 NOTOA8MTQ0 251 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 MRPS14O60783 128 aaKnown RBP5.14□□□□□ -1.59
SCAF11-211ENST00000547950 FCGR3BO75015 233 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 TUSC2O75896 110 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 FRMD6-AS1P0C7T7 363 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 ZP3P21754 424 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 GALP22466 123 aa5.14□□□□□ -1.59
SCAF11-211ENST00000547950 DUTP33316 252 aaKnown RBP5.14□□□□□ -1.59
SCAF11-211ENST00000547950 SYNJ2BPP57105 145 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms