RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 C5orf30Q96GV9 206 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 DUX5Q96PT3 197 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 S1PR3Q99500 378 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 SSX3Q99909 188 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF251Q9BRH9 671 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TINAGL1Q9GZM7 467 aaPredicted RBP5.08□□□□□ -1.6
PRKDC-211ENST00000546304 DPAGT1Q9H3H5 408 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TAS2R8Q9NYW2 309 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF221Q9UK13 617 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TCF19Q9Y242 345 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 POMT1Q9Y6A1 747 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 TNCP24821 2201 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 PLXNB1O43157 2135 aa5.08□□□□□ -1.6
PRKDC-211ENST00000546304 IGHV3-72A0A0B4J1Y9 119 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 ANKRD20A5PA0PJZ0 165 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 OR5H14A6NHG9 310 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 J3QRK9 145 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 M0R1X1 148 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 VENTXO95231 258 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 RAB3DO95716 219 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 GAPDHP04406 335 aaKnown RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 IFNA6P05013 189 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 AKAIN1P0CW23 69 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 BRS3P32247 399 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 FAUP35544 74 aaKnown RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 PPP5CP53041 499 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 TSPAN5P62079 268 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 UBA52P62987 128 aaKnown RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 KLF9Q13886 244 aaPredicted RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 HABP2Q14520 560 aaPredicted RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 SLC9A3R2Q15599 337 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 MZT2BQ6NZ67 158 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 MOB3BQ86TA1 216 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 TOMM5Q8N4H5 51 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 DRAM1Q8N682 238 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 ZDHHC22Q8N966 263 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 GIMAP1Q8WWP7 306 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 S100ZQ8WXG8 99 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 NABP2Q9BQ15 211 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF2Q9BSG1 426 aaPredicted RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 THAP7Q9BT49 309 aaPredicted RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 CHIAQ9BZP6 476 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 WDR12Q9GZL7 423 aaKnown RBP5.07□□□□□ -1.6
PRKDC-211ENST00000546304 GHITMQ9H3K2 345 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 TNFRSF19Q9NS68 423 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 SDHAF2Q9NX18 166 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 RNF150Q9ULK6 438 aa5.07□□□□□ -1.6
PRKDC-211ENST00000546304 A6NDX4 124 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 H0YJW9 148 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 CHST1O43916 411 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 GPR137BO60478 399 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SLC22A5O76082 557 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 IGKV1D-33P01593 117 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 IGKV1-33P01594 117 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 IGLV2-14P01704 120 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 APOA2P02652 100 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SLPIP03973 132 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SNRNP70P08621 437 aaKnown RBP5.06□□□□□ -1.6
PRKDC-211ENST00000546304 IL7P13232 177 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 CD24P25063 80 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 INPP1P49441 399 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 RAB13P51153 203 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 RIPPLY3P57055 190 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SRSF2Q01130 221 aaKnown RBP5.06□□□□□ -1.6
PRKDC-211ENST00000546304 HES1Q14469 280 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 MSMO1Q15800 293 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 LY6EQ16553 131 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 BAK1Q16611 211 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SCGB2B2Q4G0G5 96 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF57Q68EA5 555 aaPredicted RBP5.06□□□□□ -1.6
PRKDC-211ENST00000546304 DHRS7BQ6IAN0 325 aaPredicted RBP5.06□□□□□ -1.6
PRKDC-211ENST00000546304 GLDNQ6ZMI3 551 aaPredicted RBP5.06□□□□□ -1.6
PRKDC-211ENST00000546304 KCTD9Q7L273 389 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 LHFPL1Q86WI0 220 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 PRIMA1Q86XR5 153 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 TMEM219Q86XT9 240 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 DRAXINQ8NBI3 349 aaPredicted RBP5.06□□□□□ -1.6
PRKDC-211ENST00000546304 OR6F1Q8NGZ6 308 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 PIFOQ8TCI5 191 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 CAPSLQ8WWF8 208 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 DEDD2Q8WXF8 326 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 BORCS5Q969J3 196 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SDHCQ99643 169 aaPredicted RBP5.06□□□□□ -1.6
PRKDC-211ENST00000546304 PRRT1Q99946 306 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 CCDC32Q9BV29 185 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SLC5A7Q9GZV3 580 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 RAB18Q9NP72 206 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 MCUBQ9NWR8 336 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 SLC2A8Q9NY64 477 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 PITPNC1Q9UKF7 332 aa5.06□□□□□ -1.6
PRKDC-211ENST00000546304 FAM90A9PA6NNJ1 464 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 DISC1C4P0D8 188 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 H7C2Y5 167 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 TRIM77I1YAP6 450 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 TNFSF12O43508 249 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 PROP1O75360 226 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 OR2F2O95006 317 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 RLN1P04808 185 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF735P0CB33 412 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 FAM106CPP0CH98 169 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms