RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BRWD1-AS2P59051 145 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 RPS16P62249 146 aaKnown RBP11.94□□□□□ -0.5
CD9-210ENST00000543916 PSG5Q15238 335 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 C5orf64Q2M2E5 130 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 ZNF66Q6ZN08 573 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 LHFPL1Q86WI0 220 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 Q8N402 240 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 ARRDC1Q8N5I2 433 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 ZBTB34Q8NCN2 500 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 OR4C16Q8NGL9 310 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 RNF5Q99942 180 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 THAP7Q9BT49 309 aaPredicted RBP11.94□□□□□ -0.5
CD9-210ENST00000543916 WNT10AQ9GZT5 417 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 FBXL15Q9H469 300 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 BATF3Q9NR55 127 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 KIAA1456Q9P272 454 aa11.94□□□□□ -0.5
CD9-210ENST00000543916 FCGR3BO75015 233 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 CRYZL1O95825 349 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 IGLV2-23P01705 113 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 AKAIN1P0CW23 69 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 CBX3Q13185 183 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 SLC35E3Q7Z769 313 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 WIPF2Q8TF74 440 aaPredicted RBP11.93□□□□□ -0.5
CD9-210ENST00000543916 HARBI1Q96MB7 349 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
CD9-210ENST00000543916 SRRQ9GZT4 340 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 TPSG1Q9NRR2 321 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 PRELID3BQ9Y3B1 194 aa11.93□□□□□ -0.5
CD9-210ENST00000543916 SRRM4A7MD48 611 aaKnown RBP11.92□□□□□ -0.5
CD9-210ENST00000543916 SLC25A17O43808 307 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 SPDEFO95238 335 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 HLA-DRB1P01911 266 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 PPP5CP53041 499 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 UCP3P55916 312 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 MEF2DQ14814 521 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 HIST2H2BDQ6DRA6 164 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 BORCS5Q969J3 196 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 MRGPRFQ96AM1 343 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 NOL4LQ96MY1 436 aaPredicted RBP11.92□□□□□ -0.5
CD9-210ENST00000543916 CITED1Q99966 193 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 RSRP1Q9BUV0 290 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 METTL1Q9UBP6 276 aaKnown RBP11.92□□□□□ -0.5
CD9-210ENST00000543916 LINC00527Q9UJ94 153 aa11.92□□□□□ -0.5
CD9-210ENST00000543916 IGHV7-81A0A0B4J1V7 117 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 GPR31O00270 319 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 FCN1O00602 326 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 SHOXO15266 292 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 RAMP3O60896 148 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 PGLYRP1O75594 196 aaPredicted RBP11.91□□□□□ -0.5
CD9-210ENST00000543916 RLN1P04808 185 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 LGALS7P47929 136 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 KLF9Q13886 244 aaPredicted RBP11.91□□□□□ -0.5
CD9-210ENST00000543916 PLGLAQ15195 96 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 SCGB2B2Q4G0G5 96 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 PHLDA2Q53GA4 152 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 LIN54Q6MZP7 749 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 SHISA2Q6UWI4 295 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 C10orf99Q6UWK7 81 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 OR4S2Q8NH73 311 aa11.91□□□□□ -0.5
CD9-210ENST00000543916 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
CD9-210ENST00000543916 SDHCQ99643 169 aaPredicted RBP11.91□□□□□ -0.5
CD9-210ENST00000543916 DISC1C4P0D8 188 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 KCNAB3O43448 404 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 CRYGBP07316 175 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 PGAM2P15259 253 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 NDPQ00604 133 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 CATR1Q13166 79 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 LPCAT3Q6P1A2 487 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 SLC38A6Q8IZM9 456 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 SPAG16Q8N0X2 631 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 C11orf44Q8N8P7 122 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 TERB2Q8NHR7 220 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 CLCC1Q96S66 551 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 PTTG2Q9NZH5 202 aa11.9□□□□□ -0.5
CD9-210ENST00000543916 AP4M1O00189 453 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 PI3P19957 117 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 KIR2DS2P43631 304 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 PJVKQ0ZLH3 352 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 BAK1Q16611 211 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 MRGPRG-AS1Q2M3A8 158 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 IDO2Q6ZQW0 420 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 FOXRED2Q8IWF2 684 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 CMTM1Q8IZ96 169 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 STPG2Q8N412 459 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 TOMM5Q8N4H5 51 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 GDPD1Q8N9F7 314 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 OR51S1Q8NGJ8 323 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 OR13C8Q8NGS7 320 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 MARCH1Q8TCQ1 289 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 OR51J1Q9H342 316 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 AKIP1Q9NQ31 210 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 FBXO7Q9Y3I1 522 aa11.89□□□□□ -0.51
CD9-210ENST00000543916 ATP6V0E1O15342 81 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 RBFOX2O43251 390 aaKnown RBP eCLIP11.88□□□□□ -0.51
CD9-210ENST00000543916 CA2P00918 260 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 SAA1P0DJI8 122 aaPredicted RBP11.88□□□□□ -0.51
CD9-210ENST00000543916 CD28P10747 220 aa11.88□□□□□ -0.51
CD9-210ENST00000543916 UBE2KP61086 200 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms