RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 PHB2Q99623 299 aa10.1□□□□□ -0.79
RTN3-212ENST00000543123 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
RTN3-212ENST00000543123 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
RTN3-212ENST00000543123 KCNK7Q9Y2U2 307 aa10.1□□□□□ -0.79
RTN3-212ENST00000543123 RYR3Q15413 4870 aa10.1□□□□□ -0.79
RTN3-212ENST00000543123 RAB27BO00194 218 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 IGLV2-23P01705 113 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 DTYMKP23919 212 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 LINC00205P59089 165 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 GABARAPL2P60520 117 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 TATDN3Q17R31 274 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 BVESQ8NE79 360 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 OR5T1Q8NG75 326 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 OSR1Q8TAX0 266 aaPredicted RBP10.09□□□□□ -0.79
RTN3-212ENST00000543123 USMG5Q96IX5 58 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 TINAGL1Q9GZM7 467 aaPredicted RBP10.09□□□□□ -0.79
RTN3-212ENST00000543123 ATG5Q9H1Y0 275 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 COA4Q9NYJ1 87 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 RAB26Q9ULW5 256 aa10.09□□□□□ -0.79
RTN3-212ENST00000543123 DNAH7Q8WXX0 4024 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 MPPED1O15442 326 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 SLC22A5O76082 557 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 ACTL6BO94805 426 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 CRYGBP07316 175 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 CTXN2P0C2S0 81 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 FRMD6-AS1P0C7T7 363 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 CD36P16671 472 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 UBE2KP61086 200 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 PJVKQ0ZLH3 352 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 PLA2G7Q13093 441 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 SGPP2Q8IWX5 399 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 TEX45Q8NA69 505 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 MAFIPQ8WZ33 124 aa10.08□□□□□ -0.8
RTN3-212ENST00000543123 ZNF230Q9UIE0 474 aaPredicted RBP10.08□□□□□ -0.8
RTN3-212ENST00000543123 MRPS7Q9Y2R9 242 aaKnown RBP10.08□□□□□ -0.8
RTN3-212ENST00000543123 A0A0B4J203 849 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 H0Y980 276 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 CRYZL1O95825 349 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 IGLV1-51P01701 117 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 DUTP33316 252 aaKnown RBP10.07□□□□□ -0.8
RTN3-212ENST00000543123 SSBP2P81877 361 aaPredicted RBP10.07□□□□□ -0.8
RTN3-212ENST00000543123 PRSS8Q16651 343 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 C22orf42Q6IC83 251 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 SBSPONQ8IVN8 264 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 H1FOOQ8IZA3 346 aaPredicted RBP10.07□□□□□ -0.8
RTN3-212ENST00000543123 OR9G4Q8NGQ1 327 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 FCGR1BQ92637 280 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 SPIN2AQ99865 258 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 SPIN2BQ9BPZ2 258 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 Q9H521 79 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 PEF1Q9UBV8 284 aaKnown RBP10.07□□□□□ -0.8
RTN3-212ENST00000543123 PRELID3BQ9Y3B1 194 aa10.07□□□□□ -0.8
RTN3-212ENST00000543123 HUWE1Q7Z6Z7 4374 aaKnown RBP10.06□□□□□ -0.8
RTN3-212ENST00000543123 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 TRIM64CA6NLI5 447 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 NOTOA8MTQ0 251 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 OR9G9P0C7N8 305 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 FGF9P31371 208 aaPredicted RBP10.06□□□□□ -0.8
RTN3-212ENST00000543123 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
RTN3-212ENST00000543123 TNXAQ16473 311 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 RPEL1Q2QD12 228 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 FAM209BQ5JX69 171 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 HACD4Q5VWC8 232 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 KCTD9Q7L273 389 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 OVCH2Q7RTZ1 564 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 TPRA1Q86W33 373 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 ZNF645Q8N7E2 425 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 MUC7Q8TAX7 377 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 ACOT12Q8WYK0 555 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 DDB2Q92466 427 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 DCSTAMPQ9H295 470 aa10.06□□□□□ -0.8
RTN3-212ENST00000543123 SHISA3A0PJX4 238 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 MSGN1A6NI15 193 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 TUSC2O75896 110 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 OR2A4O95047 310 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 PSMB9P28065 219 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 GNG2P59768 71 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 CDK10Q15131 360 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 CDNFQ49AH0 187 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 UBE2UQ5VVX9 321 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 LCN12Q6JVE5 192 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 GTSCR1Q86UQ5 136 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 SLC25A42Q86VD7 318 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 MMD2Q8IY49 270 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 ADAD2Q8NCV1 583 aaKnown RBP10.05□□□□□ -0.8
RTN3-212ENST00000543123 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 SRSF12Q8WXF0 261 aaKnown RBP10.05□□□□□ -0.8
RTN3-212ENST00000543123 SNAPC3Q92966 411 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 DCUN1D5Q9BTE7 237 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 ST6GALNAC5Q9BVH7 336 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 PEMTQ9UBM1 199 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
RTN3-212ENST00000543123 SRRM4A7MD48 611 aaKnown RBP10.04□□□□□ -0.8
RTN3-212ENST00000543123 A8MZ25 164 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms