RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 SRRM4A7MD48 611 aaKnown RBP18.28■□□□□ 0.52
LEMD3-203ENST00000541171 GSTT2P0CG29 244 aa18.28■□□□□ 0.52
LEMD3-203ENST00000541171 GSTT2BP0CG30 244 aa18.28■□□□□ 0.52
LEMD3-203ENST00000541171 CALRP27797 417 aaKnown RBP18.28■□□□□ 0.52
LEMD3-203ENST00000541171 TATDN3Q17R31 274 aa18.28■□□□□ 0.52
LEMD3-203ENST00000541171 ADAMTSL5Q6ZMM2 481 aa18.28■□□□□ 0.52
LEMD3-203ENST00000541171 OR10J5Q8NHC4 309 aa18.28■□□□□ 0.52
LEMD3-203ENST00000541171 MAFIPQ8WZ33 124 aa18.28■□□□□ 0.52
LEMD3-203ENST00000541171 RBM7Q9Y580 266 aaKnown RBP18.28■□□□□ 0.52
LEMD3-203ENST00000541171 EPPK1P58107 5090 aaKnown RBP18.28■□□□□ 0.52
LEMD3-203ENST00000541171 TMEM272A0A1B0GTI8 110 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 MSGN1A6NI15 193 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 CSN3P07498 182 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 DYRK1AQ13627 763 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 TPBGQ13641 420 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 TBCEQ15813 527 aaPredicted RBP18.27■□□□□ 0.52
LEMD3-203ENST00000541171 RPEL1Q2QD12 228 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 HES5Q5TA89 166 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 ZNF343Q6P1L6 599 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 GTSCR1Q86UQ5 136 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 C5orf30Q96GV9 206 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 KCNK7Q9Y2U2 307 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 V9GY05 133 aa18.27■□□□□ 0.52
LEMD3-203ENST00000541171 FCGR3AP08637 254 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 GABARAPL2P60520 117 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 TRAM1Q15629 374 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 RTL8BQ17RB0 113 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 TMEM177Q53S58 311 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 RAB3CQ96E17 227 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 USMG5Q96IX5 58 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 RAB22AQ9UL26 194 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 TNCP24821 2201 aa18.26■□□□□ 0.51
LEMD3-203ENST00000541171 A0A075B6Q4 140 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 IZUMO1RA6ND01 250 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 MPPED1O15442 326 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 MRPS14O60783 128 aaKnown RBP18.25■□□□□ 0.51
LEMD3-203ENST00000541171 RBMXL2O75526 392 aaKnown RBP18.25■□□□□ 0.51
LEMD3-203ENST00000541171 IFNA6P05013 189 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 FABP5Q01469 135 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 TNXAQ16473 311 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 MRGPRG-AS1Q2M3A8 158 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 LCN12Q6JVE5 192 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 CABLES2Q9BTV7 478 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 CCDC90BQ9GZT6 254 aa18.25■□□□□ 0.51
LEMD3-203ENST00000541171 ZNF230Q9UIE0 474 aaPredicted RBP18.25■□□□□ 0.51
LEMD3-203ENST00000541171 TRBV6-7A0A0A0MS04 114 aa18.24■□□□□ 0.51
LEMD3-203ENST00000541171 BRI3O95415 125 aa18.24■□□□□ 0.51
LEMD3-203ENST00000541171 PSMA1P25786 263 aaKnown RBP18.24■□□□□ 0.51
LEMD3-203ENST00000541171 TAGLNQ01995 201 aaKnown RBP18.24■□□□□ 0.51
LEMD3-203ENST00000541171 MLLT11Q13015 90 aaPredicted RBP18.24■□□□□ 0.51
LEMD3-203ENST00000541171 VMA21Q3ZAQ7 101 aa18.24■□□□□ 0.51
LEMD3-203ENST00000541171 IDO2Q6ZQW0 420 aa18.24■□□□□ 0.51
LEMD3-203ENST00000541171 Q8N402 240 aa18.24■□□□□ 0.51
LEMD3-203ENST00000541171 GINS4Q9BRT9 223 aa18.24■□□□□ 0.51
LEMD3-203ENST00000541171 RRASP10301 218 aa18.23■□□□□ 0.51
LEMD3-203ENST00000541171 GNB3P16520 340 aa18.23■□□□□ 0.51
LEMD3-203ENST00000541171 ADAD2Q8NCV1 583 aaKnown RBP18.23■□□□□ 0.51
LEMD3-203ENST00000541171 ACOT12Q8WYK0 555 aa18.23■□□□□ 0.51
LEMD3-203ENST00000541171 SNAPC3Q92966 411 aa18.23■□□□□ 0.51
LEMD3-203ENST00000541171 THAP7Q9BT49 309 aaPredicted RBP18.23■□□□□ 0.51
LEMD3-203ENST00000541171 DNAH1Q9P2D7 4330 aa18.23■□□□□ 0.51
LEMD3-203ENST00000541171 CSMD3Q7Z407 3707 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 BIRC6Q9NR09 4857 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 A0A0B4J203 849 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 CRYZL1O95825 349 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 PRH1P02810 166 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 OR9G9P0C7N8 305 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 RANBP1P43487 201 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 PRSS8Q16651 343 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 ZNF367Q7RTV3 350 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 TEX45Q8NA69 505 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 OR10R2Q8NGX6 335 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 YTHDF1Q9BYJ9 559 aaKnown RBP18.22■□□□□ 0.51
LEMD3-203ENST00000541171 RETNQ9HD89 108 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 LYSTQ99698 3801 aa18.22■□□□□ 0.51
LEMD3-203ENST00000541171 J3QRK9 145 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 OR2A4O95047 310 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 GADD45AP24522 165 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 MAP2K4P45985 399 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 PSMD7P51665 324 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 UBE2KP61086 200 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 SRSF12Q8WXF0 261 aaKnown RBP18.21■□□□□ 0.51
LEMD3-203ENST00000541171 PLEKHA3Q9HB20 300 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 AKIP1Q9NQ31 210 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 SIGLEC8Q9NYZ4 499 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 PEMTQ9UBM1 199 aa18.21■□□□□ 0.51
LEMD3-203ENST00000541171 LINC00473A8K010 186 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 DUTP33316 252 aaKnown RBP18.2■□□□□ 0.5
LEMD3-203ENST00000541171 RHOGP84095 191 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 ATP5G2Q06055 141 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 ARFRP1Q13795 201 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 EXOSC2Q13868 293 aaKnown RBP18.2■□□□□ 0.5
LEMD3-203ENST00000541171 DDB2Q92466 427 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 ADTRPQ96IZ2 230 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 MGLLQ99685 303 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 ACOT13Q9NPJ3 140 aa18.2■□□□□ 0.5
LEMD3-203ENST00000541171 TALDO1P37837 337 aa18.19■□□□□ 0.5
LEMD3-203ENST00000541171 OR10A3P58181 314 aa18.19■□□□□ 0.5
LEMD3-203ENST00000541171 CD81P60033 236 aa18.19■□□□□ 0.5
LEMD3-203ENST00000541171 SHISA3A0PJX4 238 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms