RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 RTL8BQ17RB0 113 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 IL34Q6ZMJ4 242 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 MAFIPQ8WZ33 124 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 MGLLQ99685 303 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 ACOT13Q9NPJ3 140 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 COA4Q9NYJ1 87 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
SNHG1-213ENST00000540725 NKX1-2Q9UD57 310 aaPredicted RBP10.78□□□□□ -0.68
SNHG1-213ENST00000540725 DNAH1Q9P2D7 4330 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 SRRM4A7MD48 611 aaKnown RBP10.77□□□□□ -0.68
SNHG1-213ENST00000540725 H0Y980 276 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 TRBV12-3P01733 135 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 APELAP0DMC3 54 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 GADD45AP24522 165 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 MAP2K4P45985 399 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 DYRK1AQ13627 763 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 MRGPRG-AS1Q2M3A8 158 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 ZFAND6Q6FIF0 208 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 ZNF343Q6P1L6 599 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 OR10R2Q8NGX6 335 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 PHB2Q99623 299 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 GAR1Q9NY12 217 aaKnown RBP10.77□□□□□ -0.68
SNHG1-213ENST00000540725 ZNF230Q9UIE0 474 aaPredicted RBP10.77□□□□□ -0.68
SNHG1-213ENST00000540725 ADAM30Q9UKF2 790 aa10.77□□□□□ -0.68
SNHG1-213ENST00000540725 RBM7Q9Y580 266 aaKnown RBP10.77□□□□□ -0.68
SNHG1-213ENST00000540725 A0A075B6Q4 140 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 MFNGO00587 321 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 ATP6V1G2O95670 118 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 RRASP10301 218 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 HIST1H1DP16402 221 aaKnown RBP10.77□□□□□ -0.69
SNHG1-213ENST00000540725 GNB3P16520 340 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 CRHBPP24387 322 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 VMA21Q3ZAQ7 101 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 PRSS48Q7RTY5 328 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 NRG4Q8WWG1 115 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 ISOC1Q96CN7 298 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 USMG5Q96IX5 58 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 GINS4Q9BRT9 223 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 EDA2RQ9HAV5 297 aa10.77□□□□□ -0.69
SNHG1-213ENST00000540725 LCE6AA0A183 80 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 MSGN1A6NI15 193 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 RAB27BO00194 218 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 PDCD5O14737 125 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 RBMXL2O75526 392 aaKnown RBP10.76□□□□□ -0.69
SNHG1-213ENST00000540725 CRYZL1O95825 349 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 OR9G9P0C7N8 305 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 DUTP33316 252 aaKnown RBP10.76□□□□□ -0.69
SNHG1-213ENST00000540725 OR10A3P58181 314 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 UBE2KP61086 200 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 TNXAQ16473 311 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 PRSS8Q16651 343 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 TATDN3Q17R31 274 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 RPEL1Q2QD12 228 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 IDO2Q6ZQW0 420 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 TEX45Q8NA69 505 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 ADAD2Q8NCV1 583 aaKnown RBP10.76□□□□□ -0.69
SNHG1-213ENST00000540725 DDB2Q92466 427 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 ADTRPQ96IZ2 230 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 SPATA25Q9BR10 227 aa10.76□□□□□ -0.69
SNHG1-213ENST00000540725 THAP7Q9BT49 309 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-213ENST00000540725 TRAV1-2A0A0B4J238 106 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 IFITM5A6NNB3 132 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 LINC00473A8K010 186 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 OR2A4O95047 310 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 CSN3P07498 182 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 RAB6AP20340 208 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 TALDO1P37837 337 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 ARFRP1Q13795 201 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 SSX1Q16384 188 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 HAGHQ16775 308 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 LCN12Q6JVE5 192 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 H1FOOQ8IZA3 346 aaPredicted RBP10.75□□□□□ -0.69
SNHG1-213ENST00000540725 Q8N402 240 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
SNHG1-213ENST00000540725 SIGLEC8Q9NYZ4 499 aa10.75□□□□□ -0.69
SNHG1-213ENST00000540725 IGKV1D-8A0A087WSZ0 117 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 A0A0B4J203 849 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 MPPED1O15442 326 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 MYL9P24844 172 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 TBCEQ15813 527 aaPredicted RBP10.74□□□□□ -0.69
SNHG1-213ENST00000540725 Q6ZS49 121 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 ZNF367Q7RTV3 350 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 OSR1Q8TAX0 266 aaPredicted RBP10.74□□□□□ -0.69
SNHG1-213ENST00000540725 ACOT12Q8WYK0 555 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 SNAPC3Q92966 411 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 TUBA4BQ9H853 241 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 AKIP1Q9NQ31 210 aa10.74□□□□□ -0.69
SNHG1-213ENST00000540725 IZUMO1RA6ND01 250 aa10.73□□□□□ -0.69
SNHG1-213ENST00000540725 METTL21EPA6NDL7 271 aa10.73□□□□□ -0.69
SNHG1-213ENST00000540725 RAB3BP20337 219 aa10.73□□□□□ -0.69
SNHG1-213ENST00000540725 RHOGP84095 191 aa10.73□□□□□ -0.69
SNHG1-213ENST00000540725 EXOSC2Q13868 293 aaKnown RBP10.73□□□□□ -0.69
SNHG1-213ENST00000540725 CENPOQ9BU64 300 aa10.73□□□□□ -0.69
SNHG1-213ENST00000540725 ZNF430Q9H8G1 570 aaPredicted RBP10.73□□□□□ -0.69
SNHG1-213ENST00000540725 NDUFB11Q9NX14 153 aa10.73□□□□□ -0.69
SNHG1-213ENST00000540725 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
SNHG1-213ENST00000540725 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 J3QRK9 145 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms