RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NRG4Q8WWG1 115 aa9.55□□□□□ -0.88
VAMP1-206ENST00000538970 MGLLQ99685 303 aa9.55□□□□□ -0.88
VAMP1-206ENST00000538970 CCDC90BQ9GZT6 254 aa9.55□□□□□ -0.88
VAMP1-206ENST00000538970 EDA2RQ9HAV5 297 aa9.55□□□□□ -0.88
VAMP1-206ENST00000538970 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
VAMP1-206ENST00000538970 ACOT13Q9NPJ3 140 aa9.55□□□□□ -0.88
VAMP1-206ENST00000538970 RAB22AQ9UL26 194 aa9.55□□□□□ -0.88
VAMP1-206ENST00000538970 SRRM4A7MD48 611 aaKnown RBP9.54□□□□□ -0.88
VAMP1-206ENST00000538970 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 SHOXO15266 292 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 CRHBPP24387 322 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 MAP2K4P45985 399 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 PSMD7P51665 324 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 SYNJ2BPP57105 145 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 TAGLNQ01995 201 aaKnown RBP9.54□□□□□ -0.88
VAMP1-206ENST00000538970 CBX3Q13185 183 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 RTL8BQ17RB0 113 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 ZNF343Q6P1L6 599 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 PRSS48Q7RTY5 328 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 OR10R2Q8NGX6 335 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 MAFIPQ8WZ33 124 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 DDB2Q92466 427 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 THAP7Q9BT49 309 aaPredicted RBP9.54□□□□□ -0.88
VAMP1-206ENST00000538970 COA4Q9NYJ1 87 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 PEF1Q9UBV8 284 aaKnown RBP9.54□□□□□ -0.88
VAMP1-206ENST00000538970 ADAM30Q9UKF2 790 aa9.54□□□□□ -0.88
VAMP1-206ENST00000538970 STARD9Q9P2P6 4700 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 SHISA3A0PJX4 238 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 H0Y980 276 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 RAB27BO00194 218 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 RBMXL2O75526 392 aaKnown RBP9.53□□□□□ -0.88
VAMP1-206ENST00000538970 APELAP0DMC3 54 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 RRASP10301 218 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 HIST1H1DP16402 221 aaKnown RBP9.53□□□□□ -0.88
VAMP1-206ENST00000538970 GNB3P16520 340 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 GADD45AP24522 165 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 OR10A3P58181 314 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 UBE2KP61086 200 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 TBCEQ15813 527 aaPredicted RBP9.53□□□□□ -0.88
VAMP1-206ENST00000538970 SSX1Q16384 188 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 ADAD2Q8NCV1 583 aaKnown RBP9.53□□□□□ -0.88
VAMP1-206ENST00000538970 ISOC1Q96CN7 298 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 USMG5Q96IX5 58 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 PHB2Q99623 299 aa9.53□□□□□ -0.88
VAMP1-206ENST00000538970 ZNF230Q9UIE0 474 aaPredicted RBP9.53□□□□□ -0.88
VAMP1-206ENST00000538970 A0A075B6Q4 140 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 TRAV1-2A0A0B4J238 106 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 MSGN1A6NI15 193 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 IFITM5A6NNB3 132 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 LINC00473A8K010 186 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 PDCD5O14737 125 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 CSN3P07498 182 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 RAB6AP20340 208 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 DUTP33316 252 aaKnown RBP9.52□□□□□ -0.89
VAMP1-206ENST00000538970 TNXAQ16473 311 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 PRSS8Q16651 343 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 VMA21Q3ZAQ7 101 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 ZFAND6Q6FIF0 208 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 IDO2Q6ZQW0 420 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 Q6ZS49 121 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 ZNF367Q7RTV3 350 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 H1FOOQ8IZA3 346 aaPredicted RBP9.52□□□□□ -0.89
VAMP1-206ENST00000538970 TEX45Q8NA69 505 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
VAMP1-206ENST00000538970 ADTRPQ96IZ2 230 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 SPATA25Q9BR10 227 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 GINS4Q9BRT9 223 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
VAMP1-206ENST00000538970 RBM7Q9Y580 266 aaKnown RBP9.52□□□□□ -0.89
VAMP1-206ENST00000538970 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 IGKV1D-8A0A087WSZ0 117 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 A0A0B4J203 849 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 ERICH4A6NGS2 130 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 OR2A4O95047 310 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 CRYZL1O95825 349 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 OR9G9P0C7N8 305 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 RPEL1Q2QD12 228 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 LCN12Q6JVE5 192 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 Q8N402 240 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 OSR1Q8TAX0 266 aaPredicted RBP9.51□□□□□ -0.89
VAMP1-206ENST00000538970 NDUFB11Q9NX14 153 aa9.51□□□□□ -0.89
VAMP1-206ENST00000538970 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 MPPED1O15442 326 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 SAA1P0DJI8 122 aaPredicted RBP9.5□□□□□ -0.89
VAMP1-206ENST00000538970 MYL9P24844 172 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 TALDO1P37837 337 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 RHOGP84095 191 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 ZNF45Q02386 682 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 ARFRP1Q13795 201 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 HAGHQ16775 308 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 TATDN3Q17R31 274 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 GTSCR1Q86UQ5 136 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 NR2C2APQ86WQ0 139 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 ACOT12Q8WYK0 555 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 SNAPC3Q92966 411 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 CENPOQ9BU64 300 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 ZNF430Q9H8G1 570 aaPredicted RBP9.5□□□□□ -0.89
VAMP1-206ENST00000538970 AKIP1Q9NQ31 210 aa9.5□□□□□ -0.89
VAMP1-206ENST00000538970 ELF5Q9UKW6 265 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms