RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 IGKV3-7A0A075B6H7 116 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 TRBV7-1A0A0A6YYK4 115 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 EREGO14944 169 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 CA11O75493 328 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 SERPINA2P20848 420 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 ASIPP42127 132 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 PLET1Q6UQ28 207 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 SSX9Q7RTT3 188 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 GBGT1Q8N5D6 347 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 DYDC1Q8WWB3 177 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 TMEM190Q8WZ59 177 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 TLCD1Q96CP7 247 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 NSL1Q96IY1 281 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 NSMCE2Q96MF7 247 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 SIKE1Q9BRV8 207 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 AGMATQ9BSE5 352 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 REEP1Q9H902 201 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 IL36GQ9NZH8 169 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 H2AFY2Q9P0M6 372 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-215ENST00000533818 ABCD2Q9UBJ2 740 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 GNG8Q9UK08 70 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 PEX16Q9Y5Y5 336 aa7.42□□□□□ -1.22
CSDE1-215ENST00000533818 LRP1Q07954 4544 aaKnown RBP7.42□□□□□ -1.22
CSDE1-215ENST00000533818 LRP2P98164 4655 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 SRRM4A7MD48 611 aaKnown RBP7.41□□□□□ -1.22
CSDE1-215ENST00000533818 ACTL6BO94805 426 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 GPR183P32249 361 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 CAPGP40121 348 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 EMP1P54849 157 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 DEFB131AP59861 70 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 PSME3P61289 254 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 TTC32Q5I0X7 151 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 FAM220AQ7Z4H9 259 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 GIPC3Q8TF64 312 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 FANCD2OSQ96PS1 177 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 JAM3Q9BX67 310 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 KRTAP1-5Q9BYS1 174 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF436Q9C0F3 470 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-215ENST00000533818 EFCAB1Q9HAE3 211 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 ARL8BQ9NVJ2 186 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 SMPD3Q9NY59 655 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-215ENST00000533818 ABRACLQ9P1F3 81 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 GMPPBQ9Y5P6 360 aa7.41□□□□□ -1.22
CSDE1-215ENST00000533818 UBE2QL1A1L167 161 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 DPPA5A6NC42 116 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 HMX3A6NHT5 357 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.22
CSDE1-215ENST00000533818 CCDC22O60826 627 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 OR2T7P0C7T2 308 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 SPP1P10451 314 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 OSMP13725 252 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 GTF2F2P13984 249 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 C4BPBP20851 252 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 CCL18P55774 89 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 PTGES3Q15185 160 aaKnown RBP7.4□□□□□ -1.22
CSDE1-215ENST00000533818 TP53I3Q53FA7 332 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 IDO2Q6ZQW0 420 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 CEACAM19Q7Z692 300 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 TEX45Q8NA69 505 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 CSNK1G2-AS1Q8NCQ2 148 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 MRPL30Q8TCC3 161 aaKnown RBP7.4□□□□□ -1.22
CSDE1-215ENST00000533818 OR2A7Q96R45 310 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 RNF2Q99496 336 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 S100A13Q99584 98 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 C20orf24Q9BUV8 137 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 PAK1IP1Q9NWT1 392 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-215ENST00000533818 AASSQ9UDR5 926 aa7.4□□□□□ -1.22
CSDE1-215ENST00000533818 TRBV5-7A0A0A0MS05 114 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 A0A1W2PP11 408 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 MFSD2BA6NFX1 497 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 DYNC1I1O14576 645 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 PRKYO43930 277 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 SC5DO75845 299 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 REG1AP05451 166 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 COX4I1P13073 169 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 RAB3AP20336 220 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 SOX2P48431 317 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 NANOS3P60323 173 aaKnown RBP7.39□□□□□ -1.23
CSDE1-215ENST00000533818 VMA21Q3ZAQ7 101 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 FAM98BQ52LJ0 330 aaKnown RBP7.39□□□□□ -1.23
CSDE1-215ENST00000533818 C10orf55Q5SWW7 151 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 OR2T5Q6IEZ7 315 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 HACD2Q6Y1H2 254 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 PARP16Q8N5Y8 322 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 OR10H4Q8NGA5 316 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 OR51A2Q8NGJ7 313 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 OR2T29Q8NH02 315 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 GIMAP1Q8WWP7 306 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 NIPSNAP3BQ9BS92 247 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 C11orf54Q9H0W9 315 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-215ENST00000533818 Q9H8V8 135 aa7.39□□□□□ -1.23
CSDE1-215ENST00000533818 IGHV3OR16-8A0A075B7F1 116 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 NPIPB5A8MRT5 1133 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 K7EMT4 169 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 M0R1X1 148 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 ITGB1BP1O14713 200 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 ZNF780AO75290 641 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-215ENST00000533818 DFFBO76075 338 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 UBE2KP61086 200 aa7.38□□□□□ -1.23
CSDE1-215ENST00000533818 PAFAH1B2P68402 229 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms