RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 IGLV2-23P01705 113 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 NFYAP23511 347 aaPredicted RBP13.38□□□□□ -0.27
PHRF1-204ENST00000532550 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
PHRF1-204ENST00000532550 GNB1P62873 340 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 CROCCP3Q8IVE0 287 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 TSPAN14Q8NG11 270 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 GRPEL2Q8TAA5 225 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 C5orf30Q96GV9 206 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 MS4A10Q96PG2 267 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 TPSG1Q9NRR2 321 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 ANXA10Q9UJ72 324 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 A0A0A6YYH2 397 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 A6NJ64 397 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 AIREO43918 545 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 SSX5O60225 188 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 TNFAIP8O95379 198 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 HLA-DQB1P01920 261 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 CRYGBP07316 175 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 ZNF645Q8N7E2 425 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 SLA2Q9H6Q3 261 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 ZNF355PQ9NSJ1 428 aa13.37□□□□□ -0.27
PHRF1-204ENST00000532550 SRRM4A7MD48 611 aaKnown RBP13.36□□□□□ -0.27
PHRF1-204ENST00000532550 LINC00473A8K010 186 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 ARPC1BO15143 372 aaKnown RBP13.36□□□□□ -0.27
PHRF1-204ENST00000532550 CRYZL1O95825 349 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 TPPP2P59282 170 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 PJVKQ0ZLH3 352 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 VMA21Q3ZAQ7 101 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 DDB2Q92466 427 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 SLC25A38Q96DW6 304 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 TMEM68Q96MH6 324 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 DCUN1D5Q9BTE7 237 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 ALX4Q9H161 411 aaPredicted RBP13.36□□□□□ -0.27
PHRF1-204ENST00000532550 SPATA2Q9UM82 520 aa13.36□□□□□ -0.27
PHRF1-204ENST00000532550 LINC01619G3V211 115 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 TUSC2O75896 110 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 TRGV3P03979 118 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 LGALS1P09382 135 aaKnown RBP13.35□□□□□ -0.27
PHRF1-204ENST00000532550 ARPC4P59998 168 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 DCTN2Q13561 401 aaKnown RBP13.35□□□□□ -0.27
PHRF1-204ENST00000532550 TEX45Q8NA69 505 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 BEST4Q8NFU0 473 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 OR5T1Q8NG75 326 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 OSR1Q8TAX0 266 aaPredicted RBP13.35□□□□□ -0.27
PHRF1-204ENST00000532550 S100A16Q96FQ6 103 aaKnown RBP13.35□□□□□ -0.27
PHRF1-204ENST00000532550 SCOCQ9UIL1 159 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 PRELID3BQ9Y3B1 194 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 TNCP24821 2201 aa13.35□□□□□ -0.27
PHRF1-204ENST00000532550 FCGR3BO75015 233 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 IGHV3-11P01762 117 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 TGFBR1P36897 503 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 RPS19P39019 145 aaKnown RBP13.34□□□□□ -0.27
PHRF1-204ENST00000532550 ECI1P42126 302 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 INSL3P51460 131 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 UBE2KP61086 200 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 LSM3P62310 102 aaKnown RBP13.34□□□□□ -0.27
PHRF1-204ENST00000532550 ASPHD1Q5U4P2 390 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 POC5Q8NA72 575 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 DCUN1D4Q92564 292 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 YIPF6Q96EC8 236 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 RHOVQ96L33 236 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 PHB2Q99623 299 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 AUNIPQ9H7T9 357 aa13.34□□□□□ -0.27
PHRF1-204ENST00000532550 RBMX2Q9Y388 322 aaKnown RBP13.34□□□□□ -0.27
PHRF1-204ENST00000532550 SORL1Q92673 2214 aa13.33□□□□□ -0.27
PHRF1-204ENST00000532550 IGKV1D-13A0A0B4J2D9 117 aa13.33□□□□□ -0.28
PHRF1-204ENST00000532550 H3BUA1 57 aa13.33□□□□□ -0.28
PHRF1-204ENST00000532550 OVOL1O14753 267 aa13.33□□□□□ -0.28
PHRF1-204ENST00000532550 HSPB1P04792 205 aaKnown RBP13.33□□□□□ -0.28
PHRF1-204ENST00000532550 IGKV1-13P0DP09 117 aa13.33□□□□□ -0.28
PHRF1-204ENST00000532550 SSBP2P81877 361 aaPredicted RBP13.33□□□□□ -0.28
PHRF1-204ENST00000532550 KCTD9Q7L273 389 aa13.33□□□□□ -0.28
PHRF1-204ENST00000532550 HOGA1Q86XE5 327 aa13.33□□□□□ -0.28
PHRF1-204ENST00000532550 GVQW1Q8N7I0 195 aa13.33□□□□□ -0.28
PHRF1-204ENST00000532550 MRPS7Q9Y2R9 242 aaKnown RBP13.33□□□□□ -0.28
PHRF1-204ENST00000532550 IGHV4OR15-8A0A075B7B6 117 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 A0A087WW49 117 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 A0A0G2JLM5 398 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 C13orf42A0A1B0GVH6 325 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 MSGN1A6NI15 193 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 XRCC3O43542 346 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 ACTL6BO94805 426 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 FCGR2CP31995 323 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 CBX5P45973 191 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 TNXAQ16473 311 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 PRSS8Q16651 343 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 ZNF429Q86V71 674 aa13.32□□□□□ -0.28
PHRF1-204ENST00000532550 DLX4Q92988 240 aaPredicted RBP13.32□□□□□ -0.28
PHRF1-204ENST00000532550 HSD17B10Q99714 261 aaKnown RBP13.32□□□□□ -0.28
PHRF1-204ENST00000532550 CREBL2O60519 120 aaPredicted RBP13.31□□□□□ -0.28
PHRF1-204ENST00000532550 IGLV2-14P01704 120 aa13.31□□□□□ -0.28
PHRF1-204ENST00000532550 SLURP1P55000 103 aa13.31□□□□□ -0.28
PHRF1-204ENST00000532550 RPL30P62888 115 aaKnown RBP13.31□□□□□ -0.28
PHRF1-204ENST00000532550 UBE2NLQ5JXB2 153 aa13.31□□□□□ -0.28
PHRF1-204ENST00000532550 IDO2Q6ZQW0 420 aa13.31□□□□□ -0.28
PHRF1-204ENST00000532550 TCTEX1D2Q8WW35 142 aa13.31□□□□□ -0.28
PHRF1-204ENST00000532550 ACOT12Q8WYK0 555 aa13.31□□□□□ -0.28
PHRF1-204ENST00000532550 MPPED1O15442 326 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 SAP30O75446 220 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 FCER2P06734 321 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms