RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 A0A1W2PRD5 423 aa17.79■□□□□ 0.44
PACSIN3-209ENST00000532457 A0A1W2PRF3 423 aa17.79■□□□□ 0.44
PACSIN3-209ENST00000532457 A0A1W2PRM7 423 aa17.79■□□□□ 0.44
PACSIN3-209ENST00000532457 PAX8Q06710 450 aa17.79■□□□□ 0.44
PACSIN3-209ENST00000532457 PPP1R1CQ8WVI7 109 aa17.79■□□□□ 0.44
PACSIN3-209ENST00000532457 TMEM186Q96B77 213 aa17.79■□□□□ 0.44
PACSIN3-209ENST00000532457 NMES1Q9C002 83 aa17.79■□□□□ 0.44
PACSIN3-209ENST00000532457 TOX4O94842 621 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 MSMBP08118 114 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 IGHV4-31P0DP07 118 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 HOXB4P17483 251 aaPredicted RBP17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 VDAC1P21796 283 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 THBS3P49746 956 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 TCTEX1D1Q8N7M0 179 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 HEXA-AS1Q9H8Q6 139 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 FAM212BQ9NTI7 297 aaPredicted RBP17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 HIVEP1P15822 2718 aa17.78■□□□□ 0.44
PACSIN3-209ENST00000532457 KRASP01116 189 aa17.77■□□□□ 0.44
PACSIN3-209ENST00000532457 G6PCP35575 357 aa17.77■□□□□ 0.44
PACSIN3-209ENST00000532457 LRRC37A5PQ49AS3 106 aa17.77■□□□□ 0.44
PACSIN3-209ENST00000532457 ZBTB8BQ8NAP8 495 aaPredicted RBP17.77■□□□□ 0.44
PACSIN3-209ENST00000532457 NABP2Q9BQ15 211 aa17.77■□□□□ 0.44
PACSIN3-209ENST00000532457 ODF3BA8MYP8 253 aa17.77■□□□□ 0.43
PACSIN3-209ENST00000532457 ARG1P05089 322 aa17.77■□□□□ 0.43
PACSIN3-209ENST00000532457 RANBP3Q9H6Z4 567 aaPredicted RBP17.77■□□□□ 0.43
PACSIN3-209ENST00000532457 PRELID3BQ9Y3B1 194 aa17.77■□□□□ 0.43
PACSIN3-209ENST00000532457 ACANP16112 2415 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 TRAV20A0A0B4J274 112 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 DUXBA0A1W2PPF3 345 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 H0YIZ8 118 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 TGFAP01135 160 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 P0C879 139 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 LHFPL4Q7Z7J7 247 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 GRPEL2Q8TAA5 225 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 ASB13Q8WXK3 278 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 ADTRPQ96IZ2 230 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 RNF126Q9BV68 326 aa17.76■□□□□ 0.43
PACSIN3-209ENST00000532457 IGKV1-16P04430 117 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 PAX6P26367 422 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 OR5AN1Q8NGI8 311 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 CD300LFQ8TDQ1 290 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 LSM10Q969L4 123 aaKnown RBP17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 H0YJW9 148 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 RBFOX2O43251 390 aaKnown RBP eCLIP17.75■□□□□ 0.431e-8■■■■□ 23.6
PACSIN3-209ENST00000532457 EPHA1P21709 976 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 CYCSP99999 105 aaKnown RBP17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 RAB32Q13637 225 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 LAMTOR1Q6IAA8 161 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 FAM71F2Q6NXP2 309 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 VKORC1L1Q8N0U8 176 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 OR4D5Q8NGN0 318 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 C17orf50Q8WW18 174 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 LHX4Q969G2 390 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 PLEKHA2Q9HB19 425 aa17.75■□□□□ 0.43
PACSIN3-209ENST00000532457 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.74■□□□□ 0.434e-7■□□□□ 11.3
PACSIN3-209ENST00000532457 MPC2O95563 127 aa17.74■□□□□ 0.43
PACSIN3-209ENST00000532457 CRYZL1O95825 349 aa17.74■□□□□ 0.43
PACSIN3-209ENST00000532457 HPRT1P00492 218 aa17.74■□□□□ 0.43
PACSIN3-209ENST00000532457 GATA3P23771 443 aa17.74■□□□□ 0.43
PACSIN3-209ENST00000532457 PSMB6P28072 239 aa17.74■□□□□ 0.43
PACSIN3-209ENST00000532457 TGIF2LXQ8IUE1 241 aa17.74■□□□□ 0.43
PACSIN3-209ENST00000532457 SRRM4A7MD48 611 aaKnown RBP17.73■□□□□ 0.43
PACSIN3-209ENST00000532457 MBPP02686 304 aaPredicted RBP17.73■□□□□ 0.43
PACSIN3-209ENST00000532457 CXorf66Q5JRM2 361 aaPredicted RBP17.73■□□□□ 0.43
PACSIN3-209ENST00000532457 SLC35D1Q9NTN3 355 aa17.73■□□□□ 0.43
PACSIN3-209ENST00000532457 HIF1ANQ9NWT6 349 aa17.73■□□□□ 0.43
PACSIN3-209ENST00000532457 BOLA1Q9Y3E2 137 aa17.73■□□□□ 0.43
PACSIN3-209ENST00000532457 ABCA1O95477 2261 aa17.73■□□□□ 0.43
PACSIN3-209ENST00000532457 KCNAB3O43448 404 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 CD5LO43866 347 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 PITX3O75364 302 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 IL3RAP26951 378 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 HTR1DP28221 377 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 KIR2DS2P43631 304 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 AKR1C2P52895 323 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 R3HDM4Q96D70 268 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 AJUBAQ96IF1 538 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 RITA1Q96K30 269 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 HYLS1Q96M11 299 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 MMP24Q9Y5R2 645 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 IGHV3-72A0A0B4J1Y9 119 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 TPTE2P1Q5T6R2 138 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 DYNAPQ8N1N2 210 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 OR4S2Q8NH73 311 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 RRNAD1Q96FB5 475 aaKnown RBP17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 OR5AC2Q9NZP5 309 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 DPM3Q9P2X0 92 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 CACNG5Q9UF02 275 aa17.72■□□□□ 0.43
PACSIN3-209ENST00000532457 IGHV1-3A0A0C4DH29 117 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 A0A1B0GU03 582 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 MARCH11A6NNE9 402 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 GAPDHP04406 335 aaKnown RBP17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 C11orf87Q6NUJ2 197 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 SSX9Q7RTT3 188 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 FOXRED2Q8IWF2 684 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 COMMD9Q9P000 198 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 HILPDAQ9Y5L2 63 aa17.71■□□□□ 0.43
PACSIN3-209ENST00000532457 CENPVL3A0A0U1RRI6 287 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 NXPH3O95157 252 aa17.7■□□□□ 0.42
PACSIN3-209ENST00000532457 UBE2E1P51965 193 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms