RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 OR51A2Q8NGJ7 313 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 OR10K1Q8NGX5 313 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TNFAIP8L1Q8WVP5 186 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 C12orf43Q96C57 262 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 CPNE2Q96FN4 548 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 PGLYRP3Q96LB9 341 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DERL3Q96Q80 235 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NKX3-1Q99801 234 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 NRIP2Q9BQI9 281 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NEURL2Q9BR09 285 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 URM1Q9BTM9 101 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 RSG1Q9BU20 258 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 SHARPINQ9H0F6 387 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 SLITRK2Q9H156 845 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 METTL9Q9H1A3 318 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ISYNA1Q9NPH2 558 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ACOT13Q9NPJ3 140 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 MMP26Q9NRE1 261 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RBFOX1Q9NWB1 397 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 DUX4Q9UBX2 424 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 GLS2Q9UI32 602 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NUP50Q9UKX7 468 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 STUB1Q9UNE7 303 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TCF19Q9Y242 345 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 MRPS28Q9Y2Q9 187 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 LSM2Q9Y333 95 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 V9GYY9 64 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ARID1AO14497 2285 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RTTNQ86VV8 2226 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NF1P21359 2839 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ZANQ9Y493 2812 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TEP1Q99973 2627 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 ZNF469Q96JG9 3925 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 IGKV1D-17A0A075B6S4 117 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TRAV8-7A0A075B6U6 113 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 A0A087WXM4 84 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 A0A1W2PRD5 423 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TMEM213A2RRL7 107 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TMEM238C9JI98 176 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 SIRPB1O00241 398 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DEGS1O15121 323 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 SIGLEC5O15389 551 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 MRPS14O60783 128 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 NOS1APO75052 506 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 HSBP1O75506 76 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RBMXL2O75526 392 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 ARL6IP5O75915 188 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 FSTL3O95633 263 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 HAND1O96004 215 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 APOHP02749 345 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 OR4E1P0C645 316 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 PSMA1P25786 263 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 OR3A4PP47883 348 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DVL1P1P54792 670 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 EDDM3BP56851 147 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RPS11P62280 158 aaKnown RBP eCLIP2.24□□□□□ -2.05
SKP1-204ENST00000517691 FABP5Q01469 135 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 COL10A1Q03692 680 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 MLLT11Q13015 90 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 EDDM3AQ14507 147 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 TRAM1Q15629 374 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RPEL1Q2QD12 228 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 CHRFAM7AQ494W8 412 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 COX19Q49B96 90 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 FAM27D1Q5T7N8 215 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 WDR25Q64LD2 544 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 FAM122CQ6P4D5 195 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 GLIPR1L1Q6UWM5 242 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 Q6ZRG5 221 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 LINC00336Q6ZUF6 198 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 C1QL2Q7Z5L3 287 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ZNF561Q8N587 486 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 CD177Q8N6Q3 437 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ZSCAN4Q8NAM6 433 aaPredicted RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 OR4M1Q8NGD0 313 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RPS4Y2Q8TD47 263 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RNASEH2CQ8TDP1 164 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 FCAMRQ8WWV6 532 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RPEQ96AT9 228 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RITA1Q96K30 269 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 GAFA1Q96PS6 74 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 NICN1Q9BSH3 213 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 DCUN1D5Q9BTE7 237 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 CHST6Q9GZX3 395 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 MMP28Q9H239 520 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 VCX3AQ9NNX9 186 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 EXOSC4Q9NPD3 245 aaKnown RBP2.24□□□□□ -2.05
SKP1-204ENST00000517691 PLEKHJ1Q9NW61 149 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 RHBDL2Q9NX52 303 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 IL36RNQ9UBH0 155 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 KAAG1Q9UBP8 84 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 CTSZQ9UBR2 303 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 SPATA2Q9UM82 520 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 AUP1Q9Y679 476 aa2.24□□□□□ -2.05
SKP1-204ENST00000517691 ACANP16112 2415 aa2.23□□□□□ -2.05
SKP1-204ENST00000517691 IGHV3OR16-10A0A075B7F0 116 aa2.23□□□□□ -2.05
SKP1-204ENST00000517691 TRBV9A0A0B4J1U6 114 aa2.23□□□□□ -2.05
SKP1-204ENST00000517691 IGHV2-70DA0A0C4DH43 119 aa2.23□□□□□ -2.05
SKP1-204ENST00000517691 IGKV1-12A0A0C4DH73 117 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms