RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 IFITM5A6NNB3 132 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 A8MZ25 164 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 RAB27BO00194 218 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 RAB6AP20340 208 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 MYL9P24844 172 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 OR10A3P58181 314 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 KLF5Q13887 457 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 SGPP2Q8IWX5 399 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 Q8N1Y9 231 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 BVESQ8NE79 360 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 USMG5Q96IX5 58 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 ZNF230Q9UIE0 474 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-229ENST00000512418 A0A075B6Q4 140 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 METTL21EPA6NDL7 271 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 SRRM4A7MD48 611 aaKnown RBP11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 UBE2KP61086 200 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 SSX1Q16384 188 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 Q6ZS49 121 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 DDB2Q92466 427 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 CITED4Q96RK1 184 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 PHB2Q99623 299 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 VCX3BQ9H321 246 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 C19orf73Q9NVV2 129 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 NDUFB11Q9NX14 153 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 COA4Q9NYJ1 87 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 BLOC1S6Q9UL45 172 aa11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 DYNC2H1Q8NCM8 4307 aaKnown RBP11.24□□□□□ -0.61
CCHCR1-229ENST00000512418 H0Y980 276 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 LYL1P12980 280 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 RAB3BP20337 219 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 TALDO1P37837 337 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 DEFA5Q01523 94 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 DYRK1AQ13627 763 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 ARFRP1Q13795 201 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 H1FOOQ8IZA3 346 aaPredicted RBP11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 TEX45Q8NA69 505 aa11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
CCHCR1-229ENST00000512418 MSGN1A6NI15 193 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 CRYZL1O95825 349 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 APELAP0DMC3 54 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 DTYMKP23919 212 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 HSPA13P48723 471 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 TNXAQ16473 311 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 PRSS8Q16651 343 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 TATDN3Q17R31 274 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 RPEL1Q2QD12 228 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 IL34Q6ZMJ4 242 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 IDO2Q6ZQW0 420 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 ADAD2Q8NCV1 583 aaKnown RBP11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 CNBD2Q96M20 576 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 PALMDQ9NP74 551 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 SIGLEC8Q9NYZ4 499 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 RYR2Q92736 4967 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 SACSQ9NZJ4 4579 aa11.22□□□□□ -0.61
CCHCR1-229ENST00000512418 A0A0B4J203 849 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 TRDV1A0A1B0GX56 115 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 LINC00473A8K010 186 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 MPPED1O15442 326 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 CREBL2O60519 120 aaPredicted RBP11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 OR2A4O95047 310 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 TRBV12-3P01733 135 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 OR9G9P0C7N8 305 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 GALP22466 123 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 LCN12Q6JVE5 192 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 IZUMO2Q6UXV1 221 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 ACOT12Q8WYK0 555 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 ATG5Q9H1Y0 275 aa11.21□□□□□ -0.61
CCHCR1-229ENST00000512418 TNCP24821 2201 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 FAM223BA6NKX1 122 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 RBMXL2O75526 392 aaKnown RBP11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 ACTL6BO94805 426 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 CSN3P07498 182 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 GTSCR1Q86UQ5 136 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 NR2C2APQ86WQ0 139 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 FAM223AQ8IWN6 122 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 Q8N402 240 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 ZNF645Q8N7E2 425 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 SNAPC3Q92966 411 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 ISOC1Q96CN7 298 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 SPIN2AQ99865 258 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 SPIN2BQ9BPZ2 258 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 THAP7Q9BT49 309 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 ZNF430Q9H8G1 570 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 ADAM30Q9UKF2 790 aa11.2□□□□□ -0.62
CCHCR1-229ENST00000512418 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
CCHCR1-229ENST00000512418 SAA1P0DJI8 122 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms