RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SLC25A17O43808 307 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 FBXO24O75426 580 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 SPDEFO95238 335 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 CRYZL1O95825 349 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 RRASP10301 218 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 GNRHRP30968 328 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 NDPQ00604 133 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 ACTBL2Q562R1 376 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 TCTEX1D4Q5JR98 221 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 CENPVQ7Z7K6 275 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-210ENST00000506941 STPG2Q8N412 459 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 MFSD4AQ8N468 514 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 OR4D10Q8NGI6 311 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 OR6F1Q8NGZ6 308 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 TCTEX1D2Q8WW35 142 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 HARBI1Q96MB7 349 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 METTL1Q9UBP6 276 aaKnown RBP14.32□□□□□ -0.12
NPHP4-210ENST00000506941 V9GYH0 126 aa14.32□□□□□ -0.12
NPHP4-210ENST00000506941 NBEAL1Q6ZS30 2694 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 AP4M1O00189 453 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 KCNAB3O43448 404 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 GSTZ1O43708 216 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-210ENST00000506941 FCGR3BO75015 233 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 CD74P04233 296 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 TSPAN5P62079 268 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 SSBP1Q04837 148 aaKnown RBP14.31□□□□□ -0.12
NPHP4-210ENST00000506941 PLGLAQ15195 96 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 LIN54Q6MZP7 749 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 ZNF66Q6ZN08 573 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 ZNF329Q86UD4 541 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 CCDC190Q86UF4 302 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 FOXRED2Q8IWF2 684 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 TMEM229BQ8NBD8 167 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
NPHP4-210ENST00000506941 PSMB11A5LHX3 300 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 SHOXO15266 292 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 CRYGBP07316 175 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 TBPP20226 339 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 S100A5P33763 92 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 TAS2R19P59542 299 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 CBX3Q13185 183 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 RNASE10Q5GAN6 216 aaKnown RBP14.3□□□□□ -0.12
NPHP4-210ENST00000506941 AADACL3Q5VUY0 350 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 CHPT1Q8WUD6 406 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 CLCC1Q96S66 551 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 CITED2Q99967 270 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-210ENST00000506941 OR51J1Q9H342 316 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 PRELID3BQ9Y3B1 194 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 FBXO7Q9Y3I1 522 aa14.3□□□□□ -0.12
NPHP4-210ENST00000506941 ADARB2-AS1A8MUL3 147 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 ATP6V0E1O15342 81 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 IGF1P05019 195 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 LGALS7P47929 136 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 SSBP2P81877 361 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-210ENST00000506941 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 ZNF79Q15937 498 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 MRGPRG-AS1Q2M3A8 158 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 FAAP20Q6NZ36 180 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 OR6Q1Q8NGQ2 317 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
NPHP4-210ENST00000506941 OSR1Q8TAX0 266 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-210ENST00000506941 RAMP3O60896 148 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 CA2P00918 260 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 CX3CL1P78423 397 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 CD83Q01151 205 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 CFHR3Q02985 330 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 STEAP1BQ6NZ63 245 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 LHFPL1Q86WI0 220 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 ARRDC1Q8N5I2 433 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 OR51H1Q8NH63 302 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 OR4S2Q8NH73 311 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 PARP11Q9NR21 331 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 ZNF580Q9UK33 172 aa14.28□□□□□ -0.12
NPHP4-210ENST00000506941 G3V318 75 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 RAB3DO95716 219 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 TSPAN15O95858 294 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 RLN1P04808 185 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 IFNA6P05013 189 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 CSF1P09603 554 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 ZNF735P0CB33 412 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 EGR2P11161 476 aaPredicted RBP14.27□□□□□ -0.13
NPHP4-210ENST00000506941 UBE2KP61086 200 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 PRR31Q5SQ13 230 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 IDO2Q6ZQW0 420 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 PPP1R27Q86WC6 154 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 BORCS5Q969J3 196 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 RSRP1Q9BUV0 290 aa14.27□□□□□ -0.13
NPHP4-210ENST00000506941 ANKRD20A5PA0PJZ0 165 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 A6NHS1 94 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 M0QZ24 198 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 GPR31O00270 319 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 ARPC1BO15143 372 aaKnown RBP14.26□□□□□ -0.13
NPHP4-210ENST00000506941 PGLYRP1O75594 196 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-210ENST00000506941 SAA1P0DJI8 122 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-210ENST00000506941 ETV6P41212 452 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 KIR2DS2P43631 304 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 UCP3P55916 312 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 CATR1Q13166 79 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 NSUN5P1Q3KNT7 163 aa14.26□□□□□ -0.13
NPHP4-210ENST00000506941 PHLDA2Q53GA4 152 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms