RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 UCP3P55916 312 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 MEF2DQ14814 521 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 TMEM95Q3KNT9 176 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 AADACL3Q5VUY0 350 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 SHISA2Q6UWI4 295 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 KLHDC1Q8N7A1 406 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 OR4D10Q8NGI6 311 aa12.32□□□□□ -0.44
CPNE1-228ENST00000498814 KCNAB3O43448 404 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 PEX14O75381 377 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 HLA-DRB1P01911 266 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 AKAIN1P0CW23 69 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 PSG5Q15238 335 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 CNPY1Q3B7I2 92 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 LIN54Q6MZP7 749 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 LHFPL1Q86WI0 220 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 Q8N402 240 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 OSR1Q8TAX0 266 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-228ENST00000498814 WIPF2Q8TF74 440 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-228ENST00000498814 TCTEX1D2Q8WW35 142 aa12.31□□□□□ -0.44
CPNE1-228ENST00000498814 GPR31O00270 319 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 SHOXO15266 292 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 TNFSF12O43508 249 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 FCGR3BO75015 233 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 CRYZL1O95825 349 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 ZNF735P0CB33 412 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 VSIG10L2P0DP72 767 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 CATR1Q13166 79 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 LINC00299Q6ZSB3 139 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 CMTM1Q8IZ96 169 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 SLC38A6Q8IZM9 456 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 TERB2Q8NHR7 220 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 TRIM63Q969Q1 353 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 GPHA2Q96T91 129 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 CITED1Q99966 193 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 HSPB9Q9BQS6 159 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 RSRP1Q9BUV0 290 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 SRRQ9GZT4 340 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 FBXL15Q9H469 300 aa12.3□□□□□ -0.44
CPNE1-228ENST00000498814 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
CPNE1-228ENST00000498814 LINC01548A6NM66 108 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 SRRM4A7MD48 611 aaKnown RBP12.29□□□□□ -0.44
CPNE1-228ENST00000498814 DISC1C4P0D8 188 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 RBFOX2O43251 390 aaKnown RBP eCLIP12.29□□□□□ -0.447e-7■□□□□ 10.1
CPNE1-228ENST00000498814 PGLYRP1O75594 196 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-228ENST00000498814 BRWD1-AS2P59051 145 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 SRSF4Q08170 494 aaKnown RBP12.29□□□□□ -0.44
CPNE1-228ENST00000498814 PLGLAQ15195 96 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 OR2B11Q5JQS5 317 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 FOXRED2Q8IWF2 684 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 GDPD1Q8N9F7 314 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 OR4C16Q8NGL9 310 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 OR4S2Q8NH73 311 aa12.29□□□□□ -0.44
CPNE1-228ENST00000498814 IGHV7-81A0A0B4J1V7 117 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 AP4M1O00189 453 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 SLC25A17O43808 307 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 CRYGBP07316 175 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 S100GP29377 79 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 ZNF45Q02386 682 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 SCGB2B2Q4G0G5 96 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 FAAP20Q6NZ36 180 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-228ENST00000498814 SPAG16Q8N0X2 631 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 CD300LFQ8TDQ1 290 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 ZNF486Q96H40 463 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-228ENST00000498814 ZNF580Q9UK33 172 aa12.28□□□□□ -0.44
CPNE1-228ENST00000498814 TNCP24821 2201 aa12.27□□□□□ -0.44
CPNE1-228ENST00000498814 FCN1O00602 326 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 RLN1P04808 185 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 IGF1P05019 195 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 ECI1P42126 302 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 AP3S2P59780 193 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 UBE2KP61086 200 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 KLF9Q13886 244 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-228ENST00000498814 VMA21Q3ZAQ7 101 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 PPP1R27Q86WC6 154 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 STPG2Q8N412 459 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 TEX45Q8NA69 505 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 POC5Q8NA72 575 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 OR51H1Q8NH63 302 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 DEDD2Q8WXF8 326 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 MRGPRFQ96AM1 343 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 NOL4LQ96MY1 436 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-228ENST00000498814 PRRT1Q99946 306 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 OR51J1Q9H342 316 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 SLC2A8Q9NY64 477 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 PTTG2Q9NZH5 202 aa12.27□□□□□ -0.45
CPNE1-228ENST00000498814 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-228ENST00000498814 RAMP3O60896 148 aa12.26□□□□□ -0.45
CPNE1-228ENST00000498814 PGAM2P15259 253 aa12.26□□□□□ -0.45
CPNE1-228ENST00000498814 RND3P61587 244 aa12.26□□□□□ -0.45
CPNE1-228ENST00000498814 CX3CL1P78423 397 aa12.26□□□□□ -0.45
CPNE1-228ENST00000498814 PHLDA2Q53GA4 152 aa12.26□□□□□ -0.45
CPNE1-228ENST00000498814 ZNF562Q6V9R5 426 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms