RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 SSX1Q16384 188 aa11.15□□□□□ -0.62
HDLBP-247ENST00000498595 SRSF7Q16629 238 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDLBP-247ENST00000498595 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
HDLBP-247ENST00000498595 MAFIPQ8WZ33 124 aa11.15□□□□□ -0.62
HDLBP-247ENST00000498595 COA4Q9NYJ1 87 aa11.15□□□□□ -0.62
HDLBP-247ENST00000498595 RAB26Q9ULW5 256 aa11.15□□□□□ -0.62
HDLBP-247ENST00000498595 NBEAL2Q6ZNJ1 2754 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 RAB27BO00194 218 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 MRPS14O60783 128 aaKnown RBP11.14□□□□□ -0.63
HDLBP-247ENST00000498595 SCGNO76038 276 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 IGLV2-23P01705 113 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 CTXN2P0C2S0 81 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 DTYMKP23919 212 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 PJVKQ0ZLH3 352 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 C22orf42Q6IC83 251 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 DCUN1D5Q9BTE7 237 aa11.14□□□□□ -0.63
HDLBP-247ENST00000498595 DNAH9Q9NYC9 4486 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 SLC22A5O76082 557 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 CRYZL1O95825 349 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 CRYGBP07316 175 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 GABARAPL2P60520 117 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 UBE2KP61086 200 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 TNXAQ16473 311 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 Q6ZS49 121 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 SGPP2Q8IWX5 399 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-247ENST00000498595 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 USMG5Q96IX5 58 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 TINAGL1Q9GZM7 467 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-247ENST00000498595 Q9H521 79 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
HDLBP-247ENST00000498595 PRELID3BQ9Y3B1 194 aa11.13□□□□□ -0.63
HDLBP-247ENST00000498595 A0A0B4J203 849 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 MSGN1A6NI15 193 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 TRIM64CA6NLI5 447 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 H0Y980 276 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 BRI3O95415 125 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
HDLBP-247ENST00000498595 CD36P16671 472 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 PSMB9P28065 219 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 DUTP33316 252 aaKnown RBP11.12□□□□□ -0.63
HDLBP-247ENST00000498595 PRSS8Q16651 343 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 RPEL1Q2QD12 228 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 CDNFQ49AH0 187 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 H1FOOQ8IZA3 346 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-247ENST00000498595 OR9G4Q8NGQ1 327 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 FCGR1BQ92637 280 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 ST6GALNAC5Q9BVH7 336 aa11.12□□□□□ -0.63
HDLBP-247ENST00000498595 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
HDLBP-247ENST00000498595 SHISA3A0PJX4 238 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 NOTOA8MTQ0 251 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 J3QRK9 145 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 APELAP0DMC3 54 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 GNG2P59768 71 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SSBP2P81877 361 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-247ENST00000498595 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 KCTD9Q7L273 389 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 ZNF645Q8N7E2 425 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SNAPC3Q92966 411 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 DCSTAMPQ9H295 470 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SSR3Q9UNL2 185 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
HDLBP-247ENST00000498595 SMIM30A4D0T7 59 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 SRRM4A7MD48 611 aaKnown RBP11.1□□□□□ -0.63
HDLBP-247ENST00000498595 FCGR3BO75015 233 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 FGF9P31371 208 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-247ENST00000498595 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-247ENST00000498595 UBE2UQ5VVX9 321 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 ZNF343Q6P1L6 599 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 IDO2Q6ZQW0 420 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 HAPLN4Q86UW8 402 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 TPRA1Q86W33 373 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 MMD2Q8IY49 270 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 MUC7Q8TAX7 377 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 DDB2Q92466 427 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 C5orf30Q96GV9 206 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 PALMDQ9NP74 551 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 PEMTQ9UBM1 199 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 DAPK2Q9UIK4 370 aa11.1□□□□□ -0.63
HDLBP-247ENST00000498595 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 TUSC2O75896 110 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 ATP5G2Q06055 141 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 CDK10Q15131 360 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 CNIH2Q6PI25 160 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 SLC25A42Q86VD7 318 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
HDLBP-247ENST00000498595 ADAD2Q8NCV1 583 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms