RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TAS2R20P59543 309 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 CTF1Q16619 201 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 AKIRIN2Q53H80 203 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 OVCH2Q7RTZ1 564 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 REC114Q7Z4M0 266 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 ABHD5Q8WTS1 349 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 ACOT12Q8WYK0 555 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 ARPC1AQ92747 370 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 UBE2E2Q96LR5 201 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 ANAPC10Q9UM13 185 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 A0A1W2PN81 502 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 SRRM4A7MD48 611 aaKnown RBP17.63■□□□□ 0.41
SNIP1-203ENST00000493916 SOX15O60248 233 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 CHRNA7P36544 502 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 RAB9AP51151 201 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 EIF4EBP1Q13541 118 aaPredicted RBP17.63■□□□□ 0.41
SNIP1-203ENST00000493916 MSMO1Q15800 293 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 ZNF491Q8N8L2 437 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 OSR1Q8TAX0 266 aaPredicted RBP17.63■□□□□ 0.41
SNIP1-203ENST00000493916 GPR61Q9BZJ8 451 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 NAA50Q9GZZ1 169 aaKnown RBP17.63■□□□□ 0.41
SNIP1-203ENST00000493916 VSIG4Q9Y279 399 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 A3GALT2U3KPV4 340 aa17.63■□□□□ 0.41
SNIP1-203ENST00000493916 CRYZL1O95825 349 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 APOA1P02647 267 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 EIF4EP06730 217 aaKnown RBP17.62■□□□□ 0.41
SNIP1-203ENST00000493916 FCGR2CP31995 323 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 ALDH3B2P48448 385 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 RORCP51449 518 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 UBE2KP61086 200 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 SSBP2P81877 361 aaPredicted RBP17.62■□□□□ 0.41
SNIP1-203ENST00000493916 RUNX1Q01196 453 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 FXYD3Q14802 87 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 DEFB136Q30KP8 78 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 FOXB2Q5VYV0 432 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 PYHIN1Q6K0P9 492 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 KCTD9Q7L273 389 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 OR5AP2Q8NGF4 316 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 OR5M8Q8NGP6 311 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 DUX3Q96PT4 197 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 HSD17B10Q99714 261 aaKnown RBP17.62■□□□□ 0.41
SNIP1-203ENST00000493916 FAM103A1Q9BTL3 118 aaKnown RBP17.62■□□□□ 0.41
SNIP1-203ENST00000493916 MCRIP2Q9BUT9 160 aaKnown RBP17.62■□□□□ 0.41
SNIP1-203ENST00000493916 IFT46Q9NQC8 304 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 COMMD3Q9UBI1 195 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 PRELID3BQ9Y3B1 194 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 NOTCH3Q9UM47 2321 aa17.62■□□□□ 0.41
SNIP1-203ENST00000493916 ARPC1BO15143 372 aaKnown RBP17.61■□□□□ 0.41
SNIP1-203ENST00000493916 AADACP22760 399 aa17.61■□□□□ 0.41
SNIP1-203ENST00000493916 FHL3Q13643 280 aa17.61■□□□□ 0.41
SNIP1-203ENST00000493916 VMA21Q3ZAQ7 101 aa17.61■□□□□ 0.41
SNIP1-203ENST00000493916 ACTBL2Q562R1 376 aa17.61■□□□□ 0.41
SNIP1-203ENST00000493916 UNQ5815/PRO19632Q6UWF5 114 aa17.61■□□□□ 0.41
SNIP1-203ENST00000493916 TEX45Q8NA69 505 aa17.61■□□□□ 0.41
SNIP1-203ENST00000493916 MRPS7Q9Y2R9 242 aaKnown RBP17.61■□□□□ 0.41
SNIP1-203ENST00000493916 MEIS3P1A6NDR6 274 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 I3L521 148 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 PPYP01298 95 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 RPL30P62888 115 aaKnown RBP17.6■□□□□ 0.41
SNIP1-203ENST00000493916 PJVKQ0ZLH3 352 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 CDK10Q15131 360 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 GPR107Q5VW38 600 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 LFNGQ8NES3 379 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 GRPEL2Q8TAA5 225 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 GIMAP1Q8WWP7 306 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 GNB4Q9HAV0 340 aa17.6■□□□□ 0.41
SNIP1-203ENST00000493916 FCGR3BO75015 233 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 CNIH1O95406 144 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 FCER2P06734 321 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 NAT1P18440 290 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 PRSS3P35030 304 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 MRGPRG-AS1Q2M3A8 158 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 ZNF66Q6ZN08 573 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 GPR141Q7Z602 305 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 AP3S1Q92572 193 aa17.59■□□□□ 0.41
SNIP1-203ENST00000493916 TGP01266 2768 aa17.58■□□□□ 0.41
SNIP1-203ENST00000493916 PRB2P02812 416 aaPredicted RBP17.58■□□□□ 0.4
SNIP1-203ENST00000493916 GNB1P62873 340 aa17.58■□□□□ 0.4
SNIP1-203ENST00000493916 ZBTB34Q8NCN2 500 aa17.58■□□□□ 0.4
SNIP1-203ENST00000493916 OR4S2Q8NH73 311 aa17.58■□□□□ 0.4
SNIP1-203ENST00000493916 SECTM1Q8WVN6 248 aa17.58■□□□□ 0.4
SNIP1-203ENST00000493916 TCTEX1D2Q8WW35 142 aa17.58■□□□□ 0.4
SNIP1-203ENST00000493916 AURKAIP1Q9NWT8 199 aaPredicted RBP17.58■□□□□ 0.4
SNIP1-203ENST00000493916 SMIM31A0A1B0GVY4 71 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 TAS2R46P59540 309 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 EGFEM1PQ0D2K5 195 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 PRSS8Q16651 343 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 MZT2AQ6P582 158 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 MFSD4AQ8N468 514 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 OR11H1Q8NG94 326 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 TMEM68Q96MH6 324 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 SLA2Q9H6Q3 261 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 CCL28Q9NRJ3 127 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 TAS2R8Q9NYW2 309 aa17.57■□□□□ 0.4
SNIP1-203ENST00000493916 H3BUA1 57 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 CREBL2O60519 120 aaPredicted RBP17.56■□□□□ 0.4
SNIP1-203ENST00000493916 HPGDSO60760 199 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 SAA1P0DJI8 122 aaPredicted RBP17.56■□□□□ 0.4
SNIP1-203ENST00000493916 ZNF182P17025 639 aaPredicted RBP17.56■□□□□ 0.4
SNIP1-203ENST00000493916 ELK1P19419 428 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms