RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	PEF1	Q9UBV8	284 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	RBM7	Q9Y580	266 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-223	ENST00000491295	METTL21EP	A6NDL7	271 aa		13.71	□□□□□ -0.21
GGA1-223	ENST00000491295	SNRPB	P14678	240 aa	Known RBP	13.71	□□□□□ -0.21
GGA1-223	ENST00000491295	VMA21	Q3ZAQ7	101 aa		13.71	□□□□□ -0.21
GGA1-223	ENST00000491295	BVES	Q8NE79	360 aa		13.71	□□□□□ -0.21
GGA1-223	ENST00000491295	GINS4	Q9BRT9	223 aa		13.71	□□□□□ -0.21
GGA1-223	ENST00000491295	ANKRD34B	A5PLL1	514 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	IFITM5	A6NNB3	132 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	RAB27B	O00194	218 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	MFNG	O00587	321 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	HIST1H1D	P16402	221 aa	Known RBP	13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	TALDO1	P37837	337 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	UBE2K	P61086	200 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	HES5	Q5TA89	166 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	OSR1	Q8TAX0	266 aa	Predicted RBP	13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	SNAPC3	Q92966	411 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	PALMD	Q9NP74	551 aa		13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.7	□□□□□ -0.22
GGA1-223	ENST00000491295	MSGN1	A6NI15	193 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	SRRM4	A7MD48	611 aa	Known RBP	13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	CREBL2	O60519	120 aa	Predicted RBP	13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	GNB3	P16520	340 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	GAL	P22466	123 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	TBCE	Q15813	527 aa	Predicted RBP	13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	IL34	Q6ZMJ4	242 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	DDB2	Q92466	427 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	PHB2	Q99623	299 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	VCX3B	Q9H321	246 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	COA4	Q9NYJ1	87 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295	BLOC1S6	Q9UL45	172 aa		13.69	□□□□□ -0.22
GGA1-223	ENST00000491295		A0A0B4J203	849 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	AIRE	O43918	545 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	OR2A4	O95047	310 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	OR9G9	P0C7N8	305 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	MYL9	P24844	172 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	DUT	P33316	252 aa	Known RBP	13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	SYNJ2BP	P57105	145 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	ARFRP1	Q13795	201 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	SSX1	Q16384	188 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	PRSS8	Q16651	343 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	RPEL1	Q2QD12	228 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	FAM209B	Q5JX69	171 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	LCN12	Q6JVE5	192 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	ZNF367	Q7RTV3	350 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	GTSCR1	Q86UQ5	136 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	ADAD2	Q8NCV1	583 aa	Known RBP	13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	OR2K2	Q8NGT1	345 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	NRG4	Q8WWG1	115 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	PEMT	Q9UBM1	199 aa		13.68	□□□□□ -0.22
GGA1-223	ENST00000491295	TRDV1	A0A1B0GX56	115 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	FAM223B	A6NKX1	122 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	SLC22A5	O76082	557 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	CTXN2	P0C2S0	81 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	RAB3B	P20337	219 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	DTYMK	P23919	212 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	MAP2K4	P45985	399 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	HSPA13	P48723	471 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	PLA2G7	Q13093	441 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	DYRK1A	Q13627	763 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	MRGPRG-AS1	Q2M3A8	158 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	HAPLN4	Q86UW8	402 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	FAM223A	Q8IWN6	122 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295		Q8N402	240 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	ISOC1	Q96CN7	298 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	SPIN2A	Q99865	258 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	SPIN2B	Q9BPZ2	258 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	SPATA25	Q9BR10	227 aa		13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.67	□□□□□ -0.22
GGA1-223	ENST00000491295	ACTL6B	O94805	426 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	CRYZL1	O95825	349 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	CSN3	P07498	182 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	OR10A3	P58181	314 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	TNXA	Q16473	311 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	SRSF12	Q8WXF0	261 aa	Known RBP	13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	C5orf30	Q96GV9	206 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	EDA2R	Q9HAV5	297 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	NDUFB11	Q9NX14	153 aa		13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.66	□□□□□ -0.22
GGA1-223	ENST00000491295	DNAH7	Q8WXX0	4024 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295		A0A075B6Q4	140 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	MPPED1	O15442	326 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	CDK10	Q15131	360 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	SLC25A42	Q86VD7	318 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	MMD2	Q8IY49	270 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	THAP7	Q9BT49	309 aa	Predicted RBP	13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	DCSTAMP	Q9H295	470 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	TUBA4B	Q9H853	241 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	PRELID3B	Q9Y3B1	194 aa		13.65	□□□□□ -0.22
GGA1-223	ENST00000491295	TRBV9	A0A0B4J1U6	114 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	LINC00473	A8K010	186 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	ANKRD65	E5RJM6	399 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	IFNA6	P05013	189 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	MECP2	P51608	486 aa	Known RBP	13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	ATP5G2	Q06055	141 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	LAX1	Q8IWV1	398 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	TTC9C	Q8N5M4	171 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	ZNF645	Q8N7E2	425 aa		13.64	□□□□□ -0.23
GGA1-223	ENST00000491295	ACOT12	Q8WYK0	555 aa		13.64	□□□□□ -0.23

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